Pairwise Alignments

Query, 355 a.a., DNA cytosine methyltransferase from Methanococcus maripaludis S2

Subject, 440 a.a., cytosine-specific methyltransferase from Sinorhizobium meliloti 1021

 Score = 79.0 bits (193), Expect = 2e-19
 Identities = 64/241 (26%), Positives = 105/241 (43%), Gaps = 58/241 (24%)

Query: 2   NFIDLFCGCGGFSRGFVEMGFKPLLAIELDENAANSYALNYNGTVFEKKLNDILEKDVYF 61
           +F DLF GCGG S G  + G K   AIE D  A  ++A N+   +  +  +D  E   + 
Sbjct: 5   SFADLFSGCGGLSLGLTQAGLKGQFAIERDAMAFRTFATNF---IDARGASDRFEWPAWL 61

Query: 62  KLEDFLVQDDIEEFKKSNNYENLNPVVINEDIREINSKYITNKIKDTSYSKIDVIIGGPP 121
           +   + +                      E++ E + K +   ++ T    IDV+ GGPP
Sbjct: 62  ERRAWGI----------------------EELLEYHGKELLG-LRGT----IDVLAGGPP 94

Query: 122 CEGYTGANPKRERSPFNRLYRDPVGRLVLDYIRIVGDISPEVFVMENVPGILNYETRENI 181
           C+G++ A  + E  P N L++         Y+ +V  + P+  V+ENVPG+     R N+
Sbjct: 95  CQGFSFAGRRNEDDPRNLLFK--------KYVEMVEALQPQALVIENVPGMRVAHARRNV 146

Query: 182 -------------------EKEFSRAGYDELYFHVFDSENYGNPSFRKRVIILNIPLNLE 222
                               +  S AGYD +   + DS ++G P  R R+I + +  +L 
Sbjct: 147 VELQAADPGGRKISFYDKLVESLSAAGYD-VDAMLVDSASFGVPQKRSRLIAIGVSKDLC 205

Query: 223 K 223
           K
Sbjct: 206 K 206



 Score = 50.1 bits (118), Expect = 1e-10
 Identities = 28/69 (40%), Positives = 38/69 (55%), Gaps = 10/69 (14%)

Query: 297 IHPEEDRLLTVREQARLMSYPDTHIFAGGITA----------QYNQVGESVPPSLSLAIA 346
           +H  E R+LTVRE ARL S+PD  IF G  T           +Y QVG +VPP L+ AI 
Sbjct: 352 LHYREPRILTVRECARLQSFPDRFIFKGKYTTGGERRTKECPRYTQVGNAVPPLLARAIG 411

Query: 347 KEVKKYFNK 355
             + +  ++
Sbjct: 412 NALTRLLDE 420