Pairwise Alignments

Query, 355 a.a., DNA cytosine methyltransferase from Methanococcus maripaludis S2

Subject, 520 a.a., modification methylase (cytosine-specific methyltransferase (RefSeq) from Shewanella amazonensis SB2B

 Score = 62.8 bits (151), Expect = 2e-14
 Identities = 71/257 (27%), Positives = 105/257 (40%), Gaps = 49/257 (19%)

Query: 4   IDLFCGCGGFSRGF--VEMGFKPLLAIELDENAANSYALNYNGTVFEKKLNDILEKDVYF 61
           +DLF G GG   GF  V+  F+ L++ E+D  A  +  L     +      +  E D YF
Sbjct: 9   VDLFAGPGGLGEGFSSVDRTFQILVSAEMDPFAHQTLRLRAFYRLISNHAPN--ELDDYF 66

Query: 62  K----LEDFLVQDDIEEFKKSNNYENLNPVVINEDIR-EINSKYITNKIKDTSYSKIDVI 116
                + D     + E   +    E L  V+ +ED    ++S       KD  +    V+
Sbjct: 67  AFCNGVSDKPYSSETESLWEDAGEEALQIVLGSEDGNARLDSAIKKGLNKDAPW----VL 122

Query: 117 IGGPPCEGYTGANPKRERSPFN-RLYRDPVGRLVLDYIRIVGDISPEVFVMENVPGILN- 174
           IGGPPC+ Y+     R +   + R   D    L  +Y+RI+    P VFVMENV GIL+ 
Sbjct: 123 IGGPPCQAYSMVGRARNKGKKDYRPEEDNRHFLYKEYLRIIQQNKPTVFVMENVKGILSS 182

Query: 175 --------YETRENIEKEFSRAGY--------------DELYFH------------VFDS 200
                   +E  +++    +  G               D  Y H            V  +
Sbjct: 183 TVGGKRVFHEILDDLSNPDAALGVSGSGERYVICSLVTDAQYHHGDDASKFDAGQFVIRA 242

Query: 201 ENYGNPSFRKRVIILNI 217
           E+YG P  R RVI+L I
Sbjct: 243 EDYGIPQARHRVILLGI 259



 Score = 59.7 bits (143), Expect = 2e-13
 Identities = 30/58 (51%), Positives = 41/58 (70%), Gaps = 2/58 (3%)

Query: 296 FIHPE--EDRLLTVREQARLMSYPDTHIFAGGITAQYNQVGESVPPSLSLAIAKEVKK 351
           FIHP+  + R LTVRE ARL ++PD + F G  T Q++QVG +VPP L+  IA+ VK+
Sbjct: 459 FIHPDPVQCRSLTVREAARLQTFPDNYFFQGNRTQQFHQVGNAVPPLLAYKIARIVKE 516