Pairwise Alignments

Query, 355 a.a., DNA cytosine methyltransferase from Methanococcus maripaludis S2

Subject, 324 a.a., modification methylase NaeI from Phaeobacter inhibens DSM 17395

 Score = 72.0 bits (175), Expect = 2e-17
 Identities = 80/290 (27%), Positives = 129/290 (44%), Gaps = 56/290 (19%)

Query: 88  VINEDIREINSKYITNKIKDTSYSKIDVIIGGPPCEGYTGA----NPKRERSPFNRLYRD 143
           V+ ED+R         K +  +Y  ID++ GG PC  ++ A      K ER+ F+     
Sbjct: 48  VLEEDVRAF-------KEEADAYHGIDLLAGGLPCPPFSVAGKQLGEKDERNLFD----- 95

Query: 144 PVGRLVLDYIRIVGDISPEVFVMENVPGILN---YETRENIEKEFSRAGYDELYFHVFDS 200
                  D I IV    P   ++ENV G L+   ++ RE ++ + ++ GY E  + + ++
Sbjct: 96  -------DAIEIVAATRPRAVMIENVRGFLDAVFHDYREKLKTQLAKLGY-ETDWRLLNA 147

Query: 201 ENYGNPSFRKRVIIL----------NIPLNLEKTDNVDVKTALSNI-DRNALNNEKYPL- 248
            +YG P  R RV I+          N P  L        +T L  + +R     E +   
Sbjct: 148 SDYGVPQLRPRVAIVALRKEFSGQFNWPDPLPHNPRTVGETLLDLMKERGWRGAEDWAAK 207

Query: 249 PEKIAKSIHKIKIGGSAVKFKACGG-------VLDNYIRLSMEGNAETVMGKRRFIHPEE 301
            ++IA +I    +GGS    K  GG           +  L +EG          F H + 
Sbjct: 208 ADEIAPTI----VGGS----KKHGGPDLGPTRARRAWAALGVEGRTIAYEAPDPF-HNDM 258

Query: 302 DRLLTVREQARLMSYPDTHIFAGGITAQYNQVGESVPPSLSLAIAKEVKK 351
            R LTVR  AR+  +PD+  F G  T  Y QVG + PP ++ A+A+++++
Sbjct: 259 PR-LTVRMVARIQGFPDSWHFTGAKTNAYRQVGNAFPPPVAEAVARQIRQ 307