Pairwise Alignments

Query, 527 a.a., DUF2254 domain-containing protein from Methanococcus maripaludis S2

Subject, 575 a.a., hypothetical protein from Methanococcus maripaludis JJ

 Score = 68.9 bits (167), Expect = 5e-16
 Identities = 108/479 (22%), Positives = 200/479 (41%), Gaps = 47/479 (9%)

Query: 56  LSTLPQTQGAIVGIVASISIVAIQMVSQQYSTRITHLLLNKTFWGFIIAYIVSMSYEVLI 115
           L  +      +  I+ S++ + +Q+ S  Y + I  +  N  +  +   Y+V+  + +L+
Sbjct: 110 LKDITMVYATLASIIISVTFLIVQLSSSTYGSEIWEIYKNDRYVQY---YLVTTPFLILV 166

Query: 116 LGFMPTARIPVFIGGYEISYHILIGILFFFVYFDFLILLP-YMKNTINGLKPENVIDALI 174
                   + + I   E    + I +L  F+ F  + L+P Y  + ++ LKPEN++ +++
Sbjct: 167 -------GLLLVISSSENDMWLNINLLPIFLMFFSIFLIPTYFLHLMDTLKPENILKSIL 219

Query: 175 NSISKDEIKNYRSLDSENKDYKSARKIPKNTLRTVYYIIGKSLKSDHYMTARNGIILL-G 233
            SI   EI +Y +  S+   Y S  +I   ++  +  I     K + Y   +N + LL G
Sbjct: 220 TSIDTKEIISYHNSKSK---YNSTDEIQTYSVDMIANIFKVLAKQEQYKALKNCMDLLSG 276

Query: 234 ANYSVLAKKGKFKN-KKFFESYIDNLKNLGLTAYGTSF--SISREAIISLEKISKFELNR 290
             +  L +K +F   K F + Y   +K +    Y  ++   I   AI  LE I K   ++
Sbjct: 277 TYFKDLFEKYEFSELKGFLKEYTYLIKKICFMKYPENYEEDIKVSAISGLETIYKHISDK 336

Query: 291 NYDLSLRALRGIKKIGLLYAQEYELK---IDKSDEKELIHIVFEKLGNIIKFILSKPKHN 347
           N+ ++   L+ I  I     ++Y+     ID  D    I I       I  F+  K  + 
Sbjct: 337 NH-VAHYQLKCIYDITYDTIEKYDPNRSLIDMRDYGSEIMITGVCSQTIQSFLKIKLYNF 395

Query: 348 EKITSKQ--------VTFKIMMFSEILKIFELILDKLNSREILK---NEAAGTLILDALN 396
           EKI S           T+   +  E+  IF+ +    N  EI +   +      I D + 
Sbjct: 396 EKIKSNNEGDDLRSIFTYSWALSREL--IFKWVKFYSNLDEISRFQIHHTKSRWISDLIE 453

Query: 397 NFSKPAIEFIKTNENSEFLSEITIQTSETLKNFVKLISKTNEENESLN-EYLTE-----I 450
             +K   + I+ +EN   +  +     E L NF + I  T   +  +   YL E     I
Sbjct: 454 MINKDTFKIIEESENENEVKYLI----EYLLNFYREIIITKGFDYKIGLVYLFEKEHKLI 509

Query: 451 LKIYGIILDLICEKTTEKTIDTILSDISEI--WKISNGKFEQIFGIGDIVENIDNSEKI 507
              +  ++DL+  K    ++ +IL  I  +    + +G F++        E ++  EKI
Sbjct: 510 ANSFSKLIDLLESKNYTGSLYSILKSIHHLNTNNLFDGNFKKWVRKNKYEEKMERIEKI 568