Pairwise Alignments

Query, 363 a.a., 2-oxoacid:acceptor oxidoreductase subunit alpha from Methanococcus maripaludis S2

Subject, 616 a.a., 2-oxoglutarate synthase subunit korA (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

 Score =  139 bits (350), Expect = 2e-37
 Identities = 113/354 (31%), Positives = 172/354 (48%), Gaps = 20/354 (5%)

Query: 7   MQGNMACVEGAIKAGCK-----FFGGYPITPSTEIAEGMAKRLPKIGGFYSQMEDEIASI 61
           + GN A   G I A  K     + G YPITP+T+I   +AK    +G    Q EDEIA  
Sbjct: 239 INGNKATSYGLIAAAEKAGLELYLGSYPITPATDILHELAKH-KSLGVKTVQCEDEIAGC 297

Query: 62  ASIIGASWAGTKSMTATSGPGMSLMLENIGYAYMTETPCVLVNVQRGGPSTGQPTAAAQG 121
           AS +GA++AG  ++T TSGPG+ L  E +  A + E P V+VNVQRGGPSTG PT + Q 
Sbjct: 298 ASAVGAAFAGALAVTTTSGPGICLKSEAMNLAVIGELPLVIVNVQRGGPSTGLPTKSEQT 357

Query: 122 DMMQVRWGSHGDYEPIALCPSSVQEMYDFTILAFNYAEKYRIPVFVMADEIL--GHMREK 179
           D++Q  +G +G+     +  +S    +D   +A   A ++  PV ++ D  +  G    K
Sbjct: 358 DLLQALYGRNGESPMPVIAATSPTNCFDAAYMAAKIALEHMTPVVLLTDAFVANGSAAWK 417

Query: 180 VVLHDDIEIFNRE--KPEEKPCTKPYPFDKEVPP--MPTFG-EGYNVHVTGL-THGENGY 233
           +   +D    N     P+      PY  ++E       T G EG+   + GL    E G 
Sbjct: 418 LPDLNDYPAINPPYVTPDMAGNWTPYQRNEETSARYWATPGTEGFMHRIGGLEKSNETGA 477

Query: 234 PDVSAETHDKLVRRICNKILENKDDIVLYEGKYLE-SETMFICYGTPSRTVKHTVESLRE 292
                E H+K+V     K+ +  D I   E    E ++ + + +G     ++  ++ +RE
Sbjct: 478 ISTEPENHNKMVHLRQAKVDKIADYIPELEVLGDEDADLLIVGWGGTYGHLRLAMDFMRE 537

Query: 293 QGQDVGYIRLKTVFPFPDKLIAGL-KASKIIVPEMNLGQISGEVMKYAKCEVVG 345
            G+ V +   + + P P      L K  KI+V E NLGQ +G    Y + +V G
Sbjct: 538 HGKKVAFAHFQYINPLPKNTADVLRKYKKIVVAEQNLGQFAG----YLRMKVPG 587