Pairwise Alignments

Query, 363 a.a., 2-oxoacid:acceptor oxidoreductase subunit alpha from Methanococcus maripaludis S2

Subject, 295 a.a., ketoisovalerate oxidoreductase subunit vorB (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

 Score =  143 bits (361), Expect = 5e-39
 Identities = 106/308 (34%), Positives = 154/308 (50%), Gaps = 36/308 (11%)

Query: 64  IIGASWAGTKSMTATSGPGMSLMLENIGYAYMTETPCVLVNVQRGGPSTG--QPTAAAQG 121
           + G + +G   +T++S PG+SL  E I Y    E PC++VNV RGGP  G  QP   +Q 
Sbjct: 2   VYGGAGSGKMVLTSSSSPGVSLKQEGISYIAGAELPCLIVNVMRGGPGLGTIQP---SQA 58

Query: 122 DMMQ-VRWGSHGDYEPIALCPSSVQEMYDFTILAFNYAEKYRIPVFVMADEILGHMREKV 180
           D  Q V+ G HGDY  IAL P+SVQEM DF  L F  A KYR P  ++AD ++G M EKV
Sbjct: 59  DYFQTVKGGGHGDYRLIALAPASVQEMADFVALGFELAFKYRNPAIILADGVIGQMMEKV 118

Query: 181 VLHDDIEIFNREKPEEKPCTKPYPFDKEVPPMPTFGEGYNVHVTGLTHGENGYPDVSAET 240
           VL               P  KP   D EV     +        TG   G       S E 
Sbjct: 119 VL---------------PAQKPRRTDAEVIEQCPWA------ATGKAKGRKPNIITSLEL 157

Query: 241 HDKLVR----RICNKILENKDDIVLYEGKYLE-SETMFICYGTPSRTVKHTVESLREQGQ 295
             + +     R   K  + +++ V +E    E +E + + +G+ +R  +  +E  RE+G 
Sbjct: 158 KPEAMEINNIRFQAKYKQIEENEVRFEEINCEDAEYLIVAFGSMARIGQKAMELAREKGI 217

Query: 296 DVGYIRLKTVFPFPDKLIAGL--KASKIIVPEMNLGQISGEV--MKYAKCEVVGCGKIGG 351
            VG +R  T++PFP K IA    K   ++V E+N GQ+  +V      K +V   G++GG
Sbjct: 218 KVGILRPITLWPFPSKAIAAYADKVKGMLVTELNAGQMIEDVRLAVNGKVKVEHFGRLGG 277

Query: 352 ELHRPEDL 359
            +  P+++
Sbjct: 278 IVPDPDEI 285