Pairwise Alignments

Query, 566 a.a., arginine--tRNA ligase from Methanococcus maripaludis JJ

Subject, 579 a.a., arginyl-tRNA synthetase from Pseudomonas stutzeri RCH2

 Score =  138 bits (348), Expect = 5e-37
 Identities = 126/547 (23%), Positives = 250/547 (45%), Gaps = 24/547 (4%)

Query: 36  GDYSTNISFRLAKELKKAPKMIAEDIANSL-SILGIEKIEAVN-GYINFFMNYSDFSKET 93
           GD+++NI+  LAK     P+ +AE +  +L     + K+E    G++NFF N SD     
Sbjct: 41  GDFASNIALMLAKPAGLKPRDLAEKLIAALPQDAQVSKVEIAGPGFLNFFQN-SDALAGR 99

Query: 94  VSKITSEKENFGKLEKRNEKVILEHTSANPNGPFHIGHGRNMVIGDSLKRILIASGYDVE 153
           +    S+ +   +     ++V+++ +S N     H+GH R+ +IGD++ R+L   G +V 
Sbjct: 100 LETALSDAQLAVRKASATQRVVVDLSSPNLAKEMHVGHLRSTIIGDAVGRVLEFLGDEVI 159

Query: 154 TQYYVNDMGRQEAIVV-FGNEKFELDKSKKADHGIGEVYVETNKLLAENEELEQEILNLM 212
            Q +V D G Q  +++ +  EK    +S+ AD  + + Y    +   E+ E       L+
Sbjct: 160 RQNHVGDWGTQFGMLLAYLEEKPAAAESELAD--LEQFYRAAKQRFDESAEFADRARELV 217

Query: 213 KNYESACESGIENELTEKFKNAVNYSLGGFKETLSTLNIYHDKFVWESEFVKSGMVREVI 272
              ++     +   L  +F +    SL   ++    LN+       + E   +  +  ++
Sbjct: 218 VKLQAGDAQCLS--LWTRFNDI---SLSHCQKLYDRLNVKLTPADVKGESAYNSELLGIV 272

Query: 273 NRLMNTGKVVEDEVYRLDLSDY-----GIEKKLVLARLNGTSLYSTRDIAY--HINKMEN 325
           + L   G + ED   +    D      G    +++ +  G  LY+T D+A   + +++ +
Sbjct: 273 DALREKGLLTEDNGAQCVFLDEFKNAEGNPLPVIVQKAGGGYLYATTDLAAMRYRSQVLH 332

Query: 326 CDFAVNLLGADHKLTAVMVNKTLALLGY----NEAEVVFYEFISLPEGS-MSTRRGRFIS 380
            D A+  +     L   M  +     G+     + E + +  ++  +G    TR G  + 
Sbjct: 333 ADRALYFVDQRQALHFQMAFEVARRAGFVHESMQLEHMGFGTMNGADGRPFKTRDGGTVK 392

Query: 381 MDELFEEAKSRAAEEVRKRGVAQSEEEIEEIAKKIAVGAVRYNIVRIAPEKPMVFRWDEA 440
           + +L +EA+ RA   V+ +     E E+ +IA+ + + AV+Y  +         F ++  
Sbjct: 393 LIDLLDEAEQRAYALVKGKNPELDEAELRQIARAVGISAVKYADLSKHRTSDYRFNFELM 452

Query: 441 LDFEKVGCPVIQYAHARCSRILENVENISNDNLFAYEMN-ENEKTIVKLLSKLPKIVEKA 499
           L FE    P + YA+ R + +   +    +++     +  E E  +   L++  +++   
Sbjct: 453 LSFEGNTAPYLLYAYTRVASVFRKLGKGIDESTGRIRLEAEQELALAAKLAQFGEVLNSV 512

Query: 500 AEVRKPQIVANYVLDIAQGFNKFYANCPVLKEENETVRTSRLAIVSTTKTVLENTLDLLG 559
            E  +P ++  Y+ D+A  F+ FY +CP+L  E E  + SRL + + T   L+  L+LLG
Sbjct: 513 GEKGEPHLLCAYLYDLAGLFSSFYEHCPILSAEQEDQKQSRLRLAALTGKTLKQGLELLG 572

Query: 560 IEMPGKM 566
           +E   +M
Sbjct: 573 LETLERM 579