Pairwise Alignments

Query, 566 a.a., arginine--tRNA ligase from Methanococcus maripaludis JJ

Subject, 599 a.a., arginine--tRNA ligase from Vibrio cholerae E7946 ATCC 55056

 Score =  155 bits (391), Expect = 6e-42
 Identities = 139/559 (24%), Positives = 254/559 (45%), Gaps = 46/559 (8%)

Query: 36  GDYSTNISFRLAKELKKAPKMIAEDIANSLSILGI-EKIEAVN-GYINFFMNYSDFSKET 93
           GDY  N     AK+L   P+  A+ + + L++ GI  K E    G+IN F++    + + 
Sbjct: 59  GDYQANGIMGAAKQLGTNPREFAQKVLDVLNLEGIASKTEIAGPGFINIFLSEEFLAAQA 118

Query: 94  VSKITSEKENFGKLEKRNEKVILEHTSANPNGPFHIGHGRNMVIGDSLKRILIASGYDVE 153
            + +   +   G  ++  + ++ ++++ N     H+GH R+ +IGD++ R L   G+ V 
Sbjct: 119 EAALADAR--LGVAQEAPKTIVADYSAPNVAKEMHVGHLRSTIIGDAVVRTLEFLGHKVI 176

Query: 154 TQYYVNDMGRQEAIVVFGNEKFELDKSKKADHGIGEVYVETNKLLA---ENEEL---EQE 207
              ++ D G Q     FG     L++ +KA    GEV +E + L A   E+++L   +++
Sbjct: 177 RANHIGDWGTQ-----FGMLIANLERVQKAS---GEVSMELSDLEAFYRESKKLYDEDEQ 228

Query: 208 ILNLMKNYESACESGIENELTEKFKNAVNYSLGGFKETLSTLNIYHDKFVWESEFVKSGM 267
                +NY    + G +    E +K  V+ ++   +     LN+   +     E + + M
Sbjct: 229 FAETARNYVVKLQGG-DPFCLEMWKKLVDVTMIQNQRNYDRLNVSLTRENVMGESMYNDM 287

Query: 268 VREVINRLMNTGKVVEDEVYRLDLSDY-----GIEKKLVLARLNGTSLYSTRDIAYHINK 322
           + ++++ L   G  VED+  ++   +      G    +++ + +G  LY+T DIA    +
Sbjct: 288 LPQIVSDLKAKGLAVEDDGAQVVFLEEFKNKDGEPMGVIIQKRDGGFLYTTTDIACAKYR 347

Query: 323 MENCDFAVNLLGADHKLTAVMVNKTLALL---------GYNEAEV-----VFYEFISLPE 368
            E        LGAD  L  +   +   L+         GY    V      F   +    
Sbjct: 348 YET-------LGADRVLYFIDSRQHQHLMQAWTIVRKAGYIPENVSLEHHAFGMMLGKDG 400

Query: 369 GSMSTRRGRFISMDELFEEAKSRAAEEVRKRGVAQSEEEIEEIAKKIAVGAVRYNIVRIA 428
               TR G  + + +L +EA+ RA   +  +    S EE   IA  +A+ AV+Y  +   
Sbjct: 401 RPFKTRAGGTVRLADLLDEAQERAKALIESKNPELSAEEKANIANTVAMAAVKYADLSKH 460

Query: 429 PEKPMVFRWDEALDFEKVGCPVIQYAHARCSRILENVENISNDNLFAYEMNEN-EKTIVK 487
                VF WD  L FE    P +QYA+ R + +        N+     ++ E  EK ++ 
Sbjct: 461 RTTDYVFDWDNMLAFEGNTAPYMQYAYTRVASVFAKAGVDMNELTGHIQITEEKEKALIA 520

Query: 488 LLSKLPKIVEKAAEVRKPQIVANYVLDIAQGFNKFYANCPVLKEENETVRTSRLAIVSTT 547
            L +  + V+  A   +P I+ +Y+ ++A  F+ FY  CP+L  E E+++ SRL + + T
Sbjct: 521 KLLQFEEAVQSVAREGQPHIMCSYLFELAGIFSSFYEACPILVAEQESIKQSRLKLAALT 580

Query: 548 KTVLENTLDLLGIEMPGKM 566
              ++  L LLGI+   +M
Sbjct: 581 AKTIKQGLALLGIDTLERM 599