Pairwise Alignments

Query, 308 a.a., signal peptide peptidase SppA from Methanococcus maripaludis JJ

Subject, 613 a.a., signal peptide peptidase SppA, 67K type (RefSeq) from Shewanella loihica PV-4

 Score =  104 bits (259), Expect = 6e-27
 Identities = 58/192 (30%), Positives = 109/192 (56%), Gaps = 2/192 (1%)

Query: 69  LDDAENNDNIKAVIIKINSPGGGAVASEKLSRKIKEV-SEKKPVVAYIENMGASAAYQAA 127
           L  A  +D +KAV+++++SPGG A ASE++ +++  + +  KPVV  +    AS  Y  +
Sbjct: 355 LRKARFDDKVKAVVLRVDSPGGSAFASEQIRQEVLALKAANKPVVVSMGTYAASGGYWIS 414

Query: 128 SSTNYIVAERQAVVGSIGVRMELIHYYGLMEKLGINTTSITGGKYKDIGTPTRSMTEEEY 187
           +S +YI A    + GSIG+   +  +   + +LGI+T  ++   +    + T+ +++E  
Sbjct: 415 ASADYIYATPTTLTGSIGIFGMMTTFEDSLAELGIHTDGVSTSGWTAFSS-TQGISDELK 473

Query: 188 AMLESMVNESYYEFVSWVAENRNMTINETLEVADGKIYSGTQAQKVGLVDMTGTEDDAVD 247
            +++  +   Y +F+S V+E R M   E  ++A G+++SG +A ++GLVD  G  + AV 
Sbjct: 474 EIIQRHIERGYQDFISLVSEERGMKPEEVDKIAQGRVWSGKRALELGLVDELGDLEQAVT 533

Query: 248 MAVKLGNITNPD 259
            A +L  +   D
Sbjct: 534 KAAELAKLEKFD 545