Pairwise Alignments

Query, 614 a.a., ATP-binding protein from Methanococcus maripaludis JJ

Subject, 1129 a.a., hybrid sensor histidine kinase/response regulator from Vibrio cholerae E7946 ATCC 55056

 Score =  149 bits (377), Expect = 5e-40
 Identities = 109/385 (28%), Positives = 188/385 (48%), Gaps = 19/385 (4%)

Query: 241 VSKKQDVRSTVTINGVPYLAKYSPIY--NIDGEVIGMTCVGTPKSPFTVLLNSVIQKIFF 298
           +S K+ V +    +G   +A Y+PI   NI   ++    V  P+      +  + +   F
Sbjct: 304 LSGKRAVGTYTNTDGEQIIAAYAPINLKNIHWALV----VELPEKEAFARVRQLEKLFVF 359

Query: 299 IAFSSLIIAVFVAVILNKKIVDSIKKLKNSAESFGRGNYDERASIDTG--DELEELAESF 356
              +++++ V  +  L+  I   + KL  +AE    G+ DE A I+T   DE+  LA SF
Sbjct: 360 AMLTAIVLVVIASHYLSNFITSPLLKLTWAAERVSAGDLDE-AMINTERKDEIGRLAVSF 418

Query: 357 NKMADEIRKS-------DKKLKSDAHTLKTSFDELKEVDNLKSEILSIVSHELRTPLTAI 409
            +M   IR+        +K+L+S+   ++   DEL+  + LK E L+  SHELRTPL  +
Sbjct: 419 ERMQRSIREKISLIKSQNKELESNLLIIRKQNDELQLANKLKDEFLATTSHELRTPLHGM 478

Query: 410 LGYVELLKDETAGKLSEKQKEFISVISENSDRLKRITDNMSDLVTVDNKILDIKRDKINL 469
           +G  E L     G +S   K  + +I  +  RL  + D++ D   +    LDI+R  ++L
Sbjct: 479 IGIAEALISGANGPISAAHKYQLDIIISSGQRLATLVDDLLDYHKMRYGALDIQRCAVDL 538

Query: 470 KKEVNDILRSFDYFAESKNIVLLEDVDN--LDIKGDKSKIHQVLSNLIENAIKFSKKQTK 527
                 +L    +    K + ++  V    + +  D  ++ QVL NLI NAIK++  + K
Sbjct: 539 SSATRLVLELSHHLLGKKTLRIINQVSEQPVWVSADPQRLEQVLYNLIGNAIKYT-SEGK 597

Query: 528 VTVMGFEDKGNIHLEITDQGPGIPKEHLGKIFDKFYQIDSSSKREVGGSGLGLAVCKKIV 587
           + +        + +++ D G GIP E L  IF+   Q    + R   G+GLGL++ ++++
Sbjct: 598 IVISATYIDDKVRVQVVDTGQGIPAEQLEHIFEPLIQAGHDASRYRQGAGLGLSISRQLI 657

Query: 588 ESHGGSIWVESKIGKGTTVHVMFPL 612
           E   G+++V S+   GTT     PL
Sbjct: 658 ELMHGTLYVSSQPMVGTTFSFTLPL 682