Pairwise Alignments

Query, 322 a.a., DNA repair and recombination protein RadA from Methanococcus maripaludis JJ

Subject, 354 a.a., DNA recombination/repair protein RecA from Vibrio cholerae E7946 ATCC 55056

 Score = 47.8 bits (112), Expect = 4e-10
 Identities = 50/217 (23%), Positives = 88/217 (40%), Gaps = 33/217 (15%)

Query: 80  LSTGSTELDTVL-AGGIESQSVTEFAGMFGSGKTQIMHQTCVNLQMREKIFADLEGVVEE 138
           +STGS  LD  L AGG+    + E  G   SGKT +                 LE +   
Sbjct: 39  ISTGSLSLDIALGAGGLPMGRIVEIFGPESSGKTTLT----------------LELIAAA 82

Query: 139 ELEAPKAVYIDTEGTFRPERVVQMAEGAGIDGQTVLDNTFVARAYNSDMQMLFAEKIEDL 198
           + E     +ID E    P      A+  G++    +D   V++    +  +    +I D 
Sbjct: 83  QREGKTCAFIDAEHALDPV----YAKKLGVN----IDELLVSQPDTGEQAL----EICDA 130

Query: 199 IKGGNNIKLVIIDSLTS-TFRNEFTGR---GKLAERQQKLGRHMATLNKLADLYNCIVLV 254
           +     + ++++DS+ + T + E  G      +  + + L + M  L       NC+ + 
Sbjct: 131 LARSGAVDVIVVDSVAALTPKAEIEGEMGDSHMGLQARMLSQAMRKLTGNLKQSNCMCIF 190

Query: 255 TNQVAAKPDAYFGVAEQAIGGHVVGHAATFRFFLRKS 291
            NQ+  K    FG  E   GG+ +   A+ R  +R++
Sbjct: 191 INQIRMKIGVMFGNPETTTGGNALKFYASVRLDIRRT 227