Pairwise Alignments

Query, 254 a.a., transporter substrate-binding domain-containing protein from Methanococcus maripaludis JJ

Subject, 254 a.a., ABC transporter substrate-binding protein from Methanococcus maripaludis S2

 Score =  187 bits (475), Expect = 2e-52
 Identities = 103/250 (41%), Positives = 150/250 (60%), Gaps = 8/250 (3%)

Query: 9   TILLFLLSISII---SGCISSQ----NTMKRGTLTVGVCAQYPPTIYEENGNLAGFDFDL 61
           TIL+ + SI I+   SGC SS     NT+  G LTVG+  + PP  Y E+G L GFD DL
Sbjct: 5   TILVIISSILILTSFSGCTSSYGKEYNTVNPGVLTVGITPEMPPQQYYEDGELKGFDIDL 64

Query: 62  MNEIAKRMKLNTNFKIYNSKSELFDALEKNEVDCIGSRTVNYERRKFIDFTRVYYYDSVR 121
           M EIA  M L   FKIY       +AL   E+DC+ S T++ ER++ +DF+R Y    V 
Sbjct: 65  MKEIANNMGLKPEFKIYEYGGA-HEALLNGEIDCLPSMTISPERKEDMDFSRAYIQTYVV 123

Query: 122 VAVPESSSVTMLKELKGKNLGVIEGSVSSELVESYLTNVGCKCIYYDTPENLTYAVENGE 181
           VAV E+S    LK+L GKN+ V+  + + +  + YL ++      YD+ E L   V +G 
Sbjct: 124 VAVFENSPYRELKDLNGKNIAVVTNTYTEDWAKEYLGSLNANIKSYDSVEGLVSDVYSGN 183

Query: 182 VDAVIGHEMYIEHISTKCNVQKRYLDEKLSVSYWAIPINKNNPNLRNSINDVLLEMENDG 241
           +DAV+  ++ +++ S + N + R + EK+++ YWAI + K+N NL+N INDVL E++ + 
Sbjct: 184 IDAVVTDQIQLDYYSKQNNFESRLIFEKMTIEYWAIAVKKDNHNLQNEINDVLFELDENK 243

Query: 242 TLDELKLKWY 251
            L ELK KWY
Sbjct: 244 ALYELKNKWY 253