Pairwise Alignments

Query, 254 a.a., transporter substrate-binding domain-containing protein from Methanococcus maripaludis JJ

Subject, 250 a.a., ABC transporter substrate-binding protein from Methanococcus maripaludis S2

 Score =  146 bits (369), Expect = 3e-40
 Identities = 83/242 (34%), Positives = 135/242 (55%), Gaps = 2/242 (0%)

Query: 10  ILLFLLSISIISGCISSQNTMKRGTLTVGVCAQYPPTIYEENGNLAGFDFDLMNEIAKRM 69
           +++  + + + SGC           LTVGVC    PT Y E+G   GF+ +L+ EI+KR+
Sbjct: 7   LIISTIFLIVFSGCTEDNTGANNQVLTVGVCTDLAPTSYIEDGEFKGFEVELIYEISKRL 66

Query: 70  KLNTNFKIYNSKSELFDALEKNEVDC-IGSRTVNYERRKFIDFTRVYYYDSVRVAVPESS 128
            L   F +Y S SEL DA+ + EVDC IG      ER+  +DF+R Y Y    + V   S
Sbjct: 67  DLQPEFVVY-SFSELLDAVSEGEVDCGIGYIGKTPERQLKMDFSRPYGYTYSTILVRSDS 125

Query: 129 SVTMLKELKGKNLGVIEGSVSSELVESYLTNVGCKCIYYDTPENLTYAVENGEVDAVIGH 188
           +   +K L+ K++GV++ S+    +ES L ++  K I Y+   ++   + +G++D+ +  
Sbjct: 126 NCVGIKCLENKSVGVLKDSIEEYWLESLLKSMDFKIIIYENQNDINNDLLSGKIDSEVTD 185

Query: 189 EMYIEHISTKCNVQKRYLDEKLSVSYWAIPINKNNPNLRNSINDVLLEMENDGTLDELKL 248
            +   ++    + + + + +K  + Y AI I+  NP L+ SI+  LLEMENDGTL +LK 
Sbjct: 186 HITSLYLIQDYDTELKIVGDKFDIIYVAIAIDNTNPELKKSIDVALLEMENDGTLVKLKE 245

Query: 249 KW 250
           KW
Sbjct: 246 KW 247