Pairwise Alignments

Query, 254 a.a., transporter substrate-binding domain-containing protein from Methanococcus maripaludis JJ

Subject, 248 a.a., ABC transporter substrate-binding protein from Methanococcus maripaludis S2

 Score =  105 bits (262), Expect = 9e-28
 Identities = 70/242 (28%), Positives = 119/242 (49%), Gaps = 3/242 (1%)

Query: 10  ILLFLLSISIISGCISSQNTMKRGTLTVGVCAQYPPTIYEENGNLAGFDFDLMNEIAKRM 69
           ILLF + + I S C  ++   + GTLTVG+    PP  Y EN  L GF+ +L++EIA+RM
Sbjct: 7   ILLFSILV-ITSACTDTKEYSESGTLTVGIYPYMPPYQYYENDKLEGFEIELVSEIARRM 65

Query: 70  KLNTNFKIYNSKSELFDALEKNEVDCIGSRTVNYERRKFIDFTRVYYYDSVRVAVPESSS 129
                F   + K   + A     VD   S       R+        Y +S    V   S 
Sbjct: 66  NKQIEFVETDDKYGNYVAARSGTVDVSISAITKTASREKDSIYSELYMNSYSSLVCVDSK 125

Query: 130 VTMLKELKGKNLGVIEGSVSSELVESYLTNVGCKCIYYDTPENLTYAVENGEVDAVIGHE 189
            + L + +GK +G+++ +V  +  ESY  +V  + + Y    +L  A+ +GEVD  +   
Sbjct: 126 YSRLADFEGKKIGIVDDTVYVDHAESYKKSVDFEIVKYYNYYDLNSALLDGEVDGALADY 185

Query: 190 MYIEHISTKCNVQKRYLDEKLSVSYWAIPINKNNPNLRNSINDVLLEMENDGTLDELKLK 249
              ++     N     + E   + Y+ +  +  N +L N+I++VL+ M NDG+ ++L+LK
Sbjct: 186 FTCKYFMK--NDDDLTIIENTDIHYFGMVSSIGNEDLINNIDEVLMSMYNDGSYEKLRLK 243

Query: 250 WY 251
           ++
Sbjct: 244 YF 245