Pairwise Alignments

Query, 254 a.a., transporter substrate-binding domain-containing protein from Methanococcus maripaludis JJ

Subject, 248 a.a., ABC transporter substrate-binding protein from Methanococcus maripaludis S2

 Score =  161 bits (408), Expect = 1e-44
 Identities = 91/247 (36%), Positives = 143/247 (57%), Gaps = 8/247 (3%)

Query: 8   ITILLFLLSISIISGCIS---SQNTMKRGTLTVGVCAQYPPTIYEENGNLAGFDFDLMNE 64
           I  L+ ++ I  IS CIS    Q T+K GTL+VGV    PP +Y +NG L GF+ +L++E
Sbjct: 4   ICFLMAIVLILAISACISLPSEQITIKTGTLSVGVFKHAPPAVYGQNGELIGFEVELVSE 63

Query: 65  IAKRMKLNTNFKIYNSKSELFDALEKNEVDC-IGSRTVNYERRKFIDFTRVYYYDSVRVA 123
           IAKRM LN  FK Y   S L +A+  NE+DC I   +++ ER K + FTR Y +  + V 
Sbjct: 64  IAKRMNLNVEFKEY-MFSNLLNAVANNEIDCAISDISISPEREKIVSFTRAYSHTELVVL 122

Query: 124 VPESSSVTMLKELKGKNLGVIEGSVSSELVESYLTNVGCKCIYYDTPENLTYAVENGEVD 183
           V + S +  + +L GK +GV++ ++     +S   ++  + I Y+TP  L   + NG++D
Sbjct: 123 VRKESGIRTITDLNGKKIGVVDDTIHETKAKSLQKSMDFEIIEYETPIELYNDLNNGKID 182

Query: 184 AVIGHEMYIEHISTKCNVQKRYLDEKLSVSYWAIPINKNNPNLRNSINDVLLEMENDGTL 243
           A I     +++      + +  L + L + Y  I +NKNN  L + ++ VLLE+E +G +
Sbjct: 183 ATISE---MDNFKVSSYMDQLELIDTLEILYSGIAVNKNNKELLHEMDRVLLELETEGYI 239

Query: 244 DELKLKW 250
           +ELK KW
Sbjct: 240 EELKQKW 246