Pairwise Alignments

Query, 274 a.a., formate/nitrite transporter family protein from Methanococcus maripaludis JJ

Subject, 285 a.a., formate transporter FocA from Rahnella sp. WP5

 Score =  121 bits (303), Expect = 2e-32
 Identities = 83/287 (28%), Positives = 143/287 (49%), Gaps = 34/287 (11%)

Query: 2   DVNPPDKMVELAGNAGQVKGNLSPSQLLVRGVMGGAYIAMGGGLATVVGTGIGAAMGAGL 61
           D+  P    ++A +AG  K    P +     +  G +I++         TG G  +  GL
Sbjct: 8   DLILPAATAKIAEDAGVYKATKQPLKTFFLAITAGVFISIAFAFYITATTGTGT-VPYGL 66

Query: 62  GKFMAAAVFPVGLILIILTGMELVTGDMMLLPVAVFQRKASYAQLIKVWIYVYIGNLIGS 121
            K +    F +GL+L+++ G +L T  ++++ +A    + ++ QL   W+ VYIGNL+G 
Sbjct: 67  AKLVGGICFSLGLMLVVVCGADLFTSTVLIV-IAKASGRITWGQLACNWVNVYIGNLVGC 125

Query: 122 LIYASMMAFGPLRSFDSATGAASVNAFGQSAINTAQAKVLPYMAAGSMGWLAALVKGIGC 181
           L + +++ F      D+         +G + + TA  K+          ++ A+  GI  
Sbjct: 126 LFFVALIWFSGEYMVDNGL-------WGLNVLQTADHKM-------HHTFIEAVCLGILA 171

Query: 182 NWLVNLAVIGSMASTSILGKFFMIWFPIMAFVATGFEHCVANMYFIPTGMM--------- 232
           N +V LAV  S +  S++ K F +  P+  FVA+GFEH +ANM+ IP G++         
Sbjct: 172 NLMVCLAVWMSYSGRSLMDKMFAMILPVGMFVASGFEHSIANMFMIPLGIVVKNFATPEF 231

Query: 233 ---LGAT------VSVADWWLWNIIPVTIGNIIGAVVFVAMIYQFAY 270
              +GAT      +++ ++ + N+IPVTIGNIIG  + V + Y   Y
Sbjct: 232 WQAVGATPAQFAELNIPNFIIDNLIPVTIGNIIGGGLLVGLTYWVIY 278