Pairwise Alignments

Query, 161 a.a., 4Fe-4S binding protein from Methanococcus maripaludis JJ

Subject, 395 a.a., 4Fe-4S binding protein from Methanococcus maripaludis S2

 Score = 74.7 bits (182), Expect = 2e-18
 Identities = 45/130 (34%), Positives = 58/130 (44%), Gaps = 25/130 (19%)

Query: 31  IEINPELCILCNRCLEVCPVTAISSNFPEVPDIDNKCVYCNTCVETCPVDAIKITKTRVR 90
           I I  + C++CN C + CP  AI     E+      C+ C +C   CP  A+        
Sbjct: 4   ISIQEDACLVCNACAKACPTEAI-----EIAPF-KTCIQCFSCATACPTGAL-------- 49

Query: 91  VEQGNLIIENRLKSKKLDYNRKKCVMCLVCTKNCPFGAISESDDNISFDMDKCVLCGHCE 150
           VE          K  KL +N  KC +   C K CP G I + DD   +    CVLC  C 
Sbjct: 50  VE----------KDGKLVFNGSKCDLDGACQKACPVG-IKKVDDRFPYSKGHCVLCEKCV 98

Query: 151 EICPAKAIKL 160
           EICPA+ I L
Sbjct: 99  EICPAEIISL 108



 Score = 71.6 bits (174), Expect = 1e-17
 Identities = 45/155 (29%), Positives = 67/155 (43%), Gaps = 26/155 (16%)

Query: 25  QYISNKIEIN-PELCILCNRCLEVCPVTAIS-----SNFPEVPD-----IDNKCVYCNTC 73
           +Y   K+ +  PE C  C  C+E CPV  IS     ++   V D      + KC YC  C
Sbjct: 215 EYNGEKLGVKLPEACPACGLCVESCPVEVISLEVEYASAKPVTDEGLVWSEEKCAYCGPC 274

Query: 74  VETCPVDAIKITKTRVRVEQGNLIIENRLKSKKLDYNRKKCVMCLVCTKNCPFGAI---- 129
              CP  AIK+      V    L + ++ K++K +     C+ C  C   CP GA+    
Sbjct: 275 AIKCPTGAIKV------VNPKGLELPSKKKTEKAN-EFAMCIRCGACAMKCPTGALKMGK 327

Query: 130 ----SESDDNISFDMDKCVLCGHCEEICPAKAIKL 160
                +    + F    C  CG C ++CP K ++L
Sbjct: 328 MVHEGKEYARVEFSPALCNECGECVDVCPQKTLEL 362



 Score = 70.5 bits (171), Expect = 3e-17
 Identities = 44/157 (28%), Positives = 62/157 (39%), Gaps = 33/157 (21%)

Query: 38  CILCNRCLEVCPVTAISSN-----------FPEVP-DIDNKCVYCNTCVETCPVDAIKIT 85
           C+LC +C+E+CP   IS              P+ P  +   CV C  CV  CPVDAI I 
Sbjct: 91  CVLCEKCVEICPAEIISLPGKAEKPKKEIIIPQEPIAVTKDCVACGVCVPECPVDAISIE 150

Query: 86  KTRV--------------------RVEQGNLIIENRLKSKKLDYNRKKCVMCLVCTKNCP 125
              V                        G L  + +   K    N ++C+ C  C + CP
Sbjct: 151 DIAVIDTDKCIYCTVCSQTCPWNAIFVAGKLPQKRQKTIKSFTVNEEECIGCEKCVEACP 210

Query: 126 FGAISESDDNISFDM-DKCVLCGHCEEICPAKAIKLE 161
              I  + + +   + + C  CG C E CP + I LE
Sbjct: 211 GSMIEYNGEKLGVKLPEACPACGLCVESCPVEVISLE 247



 Score = 68.9 bits (167), Expect = 9e-17
 Identities = 41/140 (29%), Positives = 63/140 (45%), Gaps = 20/140 (14%)

Query: 33  INPELCILCNRCLEVCPVTAISSNFPEV-PDIDNKCVYCNTCVETCPVDAIKITKTRVRV 91
           +N E CI C +C+E CP + I  N  ++   +   C  C  CVE+CPV+ I +      V
Sbjct: 194 VNEEECIGCEKCVEACPGSMIEYNGEKLGVKLPEACPACGLCVESCPVEVISL-----EV 248

Query: 92  EQGNLIIENRLKSKKLDYNRKKCVMCLVCTKNCPFGAI-----------SESDDNISFDM 140
           E  +      +  + L ++ +KC  C  C   CP GAI           S+     + + 
Sbjct: 249 EYAS---AKPVTDEGLVWSEEKCAYCGPCAIKCPTGAIKVVNPKGLELPSKKKTEKANEF 305

Query: 141 DKCVLCGHCEEICPAKAIKL 160
             C+ CG C   CP  A+K+
Sbjct: 306 AMCIRCGACAMKCPTGALKM 325



 Score = 62.4 bits (150), Expect = 8e-15
 Identities = 44/157 (28%), Positives = 62/157 (39%), Gaps = 36/157 (22%)

Query: 31  IEINP-ELCILCNRCLEVCPVTAISSNFPE---------------------VPDIDNK-- 66
           IEI P + CI C  C   CP  A+     +                     +  +D++  
Sbjct: 26  IEIAPFKTCIQCFSCATACPTGALVEKDGKLVFNGSKCDLDGACQKACPVGIKKVDDRFP 85

Query: 67  -----CVYCNTCVETCPVDAIKITKTRVRVEQGNLIIENRLKSKKLDYNRKKCVMCLVCT 121
                CV C  CVE CP + I +     + ++  +I +  +         K CV C VC 
Sbjct: 86  YSKGHCVLCEKCVEICPAEIISLPGKAEKPKKEIIIPQEPIAV------TKDCVACGVCV 139

Query: 122 KNCPFGAISESDDNISFDMDKCVLCGHCEEICPAKAI 158
             CP  AIS  D  +  D DKC+ C  C + CP  AI
Sbjct: 140 PECPVDAISIEDIAV-IDTDKCIYCTVCSQTCPWNAI 175



 Score = 57.4 bits (137), Expect = 3e-13
 Identities = 39/159 (24%), Positives = 64/159 (40%), Gaps = 37/159 (23%)

Query: 22  LDSQYISNKIEINPELCILCNRCLEVCPVTAI--SSNFPEVPD--------IDNKCVYCN 71
           +D+  I +   I+ + CI C  C + CP  AI  +   P+            + +C+ C 
Sbjct: 144 VDAISIEDIAVIDTDKCIYCTVCSQTCPWNAIFVAGKLPQKRQKTIKSFTVNEEECIGCE 203

Query: 72  TCVETCPVDAIKITKTRVRVEQGNLIIENRLKSKKLDYNRKKCVMCLVCTKNCPFGAIS- 130
            CVE CP   I+    ++ V+                   + C  C +C ++CP   IS 
Sbjct: 204 KCVEACPGSMIEYNGEKLGVKL-----------------PEACPACGLCVESCPVEVISL 246

Query: 131 ---------ESDDNISFDMDKCVLCGHCEEICPAKAIKL 160
                     +D+ + +  +KC  CG C   CP  AIK+
Sbjct: 247 EVEYASAKPVTDEGLVWSEEKCAYCGPCAIKCPTGAIKV 285



 Score = 47.8 bits (112), Expect = 2e-10
 Identities = 32/150 (21%), Positives = 59/150 (39%), Gaps = 21/150 (14%)

Query: 15  NLDIKFELDSQYISNKIEINPELCILCNRCLEVCPVTAISSNFPEVPDIDNK-------- 66
           +L++++          +  + E C  C  C   CP  AI    P+  ++ +K        
Sbjct: 245 SLEVEYASAKPVTDEGLVWSEEKCAYCGPCAIKCPTGAIKVVNPKGLELPSKKKTEKANE 304

Query: 67  ---CVYCNTCVETCPVDAIKITKTRVRVEQGNLIIENRLKSKKLDYNRKKCVMCLVCTKN 123
              C+ C  C   CP  A+K+         G ++ E + +  +++++   C  C  C   
Sbjct: 305 FAMCIRCGACAMKCPTGALKM---------GKMVHEGK-EYARVEFSPALCNECGECVDV 354

Query: 124 CPFGAISESDDNISFDMDKCVLCGHCEEIC 153
           CP   +  + D+       CV+C  C E C
Sbjct: 355 CPQKTLELTGDDKMPLKGYCVMCLKCIEAC 384



 Score = 23.1 bits (48), Expect = 0.006
 Identities = 6/14 (42%), Positives = 10/14 (71%)

Query: 38  CILCNRCLEVCPVT 51
           C++C +C+E C  T
Sbjct: 374 CVMCLKCIEACNKT 387