Pairwise Alignments
Query, 161 a.a., 4Fe-4S binding protein from Methanococcus maripaludis JJ
Subject, 481 a.a., 4Fe-4S binding protein from Methanococcus maripaludis S2
Score = 73.6 bits (179), Expect = 4e-18
Identities = 37/117 (31%), Positives = 55/117 (47%), Gaps = 15/117 (12%)
Query: 38 CILCNRCLEVCPVTAISSNFPEVPDIDNKCVYCNTCVETCPVDAIKITKTRVRVEQGNLI 97
C CN C EVCPV AI E + C+ C C+ CP D ++I++ +V +
Sbjct: 205 CTRCNICNEVCPVDAI-----EYGQVTENCILCGNCISKCPKDVLEISEFKV------VK 253
Query: 98 IENRLKSKKLDYNRKKCVMCLVCTKNCPFGAISESDDNISFDMDKCVLCGHCEEICP 154
+ +K+K K C+ C +C CP A+ + I +D C LC C + CP
Sbjct: 254 TKEDVKAKP----EKHCINCGLCVDKCPSNALRFENGKILYDPKTCTLCNTCVKECP 306
Score = 72.8 bits (177), Expect = 8e-18
Identities = 42/145 (28%), Positives = 67/145 (46%), Gaps = 29/145 (20%)
Query: 25 QYISNKIEINPELCILCNRCLEVCPVTAISSNFPEVPDIDNKCVYCNTCVETCPVDAIKI 84
++ + KI +P+ C LCN C++ CP + N E +D CV C C++ CP DAI I
Sbjct: 282 RFENGKILYDPKTCTLCNTCVKECP-QGVRINKGEF--VDGGCVLCELCIKECPEDAISI 338
Query: 85 TKTRVRVEQGNLIIENRLKSKKLDYNRKKCVMCLVCTKNCPFGAISESDDNISFD----- 139
+ +SK ++++C+ C C+ CP AI+ D+++F
Sbjct: 339 KE----------------RSKFTSIDKEECIACGTCSMVCPNDAITVVIDSLNFSGNKVH 382
Query: 140 -----MDKCVLCGHCEEICPAKAIK 159
D CV+C C CP I+
Sbjct: 383 SKVIFNDNCVICEKCAIHCPRDVIE 407
Score = 66.6 bits (161), Expect = 5e-16
Identities = 46/138 (33%), Positives = 58/138 (42%), Gaps = 22/138 (15%)
Query: 33 INPELCILCNRCLEVCPVTAISSNFPEVPDIDNK----------CVYCNTCVETCPVDAI 82
I+ E CI C C VCP AI+ + NK CV C C CP D I
Sbjct: 347 IDKEECIACGTCSMVCPNDAITVVIDSLNFSGNKVHSKVIFNDNCVICEKCAIHCPRDVI 406
Query: 83 KITKTRVRVEQGNLIIENRLKSKKLDYNRKKCVMCLVCTKNCPFGAISESDDNISFDMDK 142
+ T +V EN DY CV C +CT CP AI + + N +K
Sbjct: 407 ENTSGHKKVVDR----ENSYIRTDNDY----CVKCGLCTIICPNDAIDKGEINT----EK 454
Query: 143 CVLCGHCEEICPAKAIKL 160
C C C ICP +AI++
Sbjct: 455 CEYCSACVNICPTRAIRI 472
Score = 64.3 bits (155), Expect = 3e-15
Identities = 40/121 (33%), Positives = 52/121 (42%), Gaps = 29/121 (23%)
Query: 42 NRCLEVCPVTAISSNFPEVPDIDNK---CVYCNTCVETCPVDAIKITKTRVRVEQGNLII 98
++C+EVCP AI ID K C+ C TC + CP AIK + E G +
Sbjct: 24 SKCMEVCPTNAIKM-------IDGKAFSCITCGTCAKECPTGAIK------KNEYGGYYV 70
Query: 99 ENRLKSKKLDYNRKKCVMCLVCTKNCPFGAISESDDNI--SFDMDKCVLCGHCEEICPAK 156
NRK C C +C CP I +D+ S+ CV+CG C CP
Sbjct: 71 -----------NRKLCTGCGICKNVCPIDIIDIREDSTGKSYPTGMCVMCGLCTTECPYN 119
Query: 157 A 157
A
Sbjct: 120 A 120
Score = 62.0 bits (149), Expect = 1e-14
Identities = 38/143 (26%), Positives = 60/143 (41%), Gaps = 36/143 (25%)
Query: 27 ISNKIEINPELCILCNRCLEVCPVTAISSNFPEVPDIDNKCVYCNTCVETCPVDAIKITK 86
+ + I I+ + C+ C +C+ +CP I E +D C CN C E CPVDAI+ +
Sbjct: 170 LRHSISIDSKKCVECGKCIYLCPKDTII----EAEMVDG-CTRCNICNEVCPVDAIEYGQ 224
Query: 87 TRVRVEQGNLIIENRLKSKKLDYNRKKCVMCLVCTKNCP--------FGAISESDDNISF 138
+ EN C++C C CP F + +D +
Sbjct: 225 ----------VTEN-------------CILCGNCISKCPKDVLEISEFKVVKTKEDVKAK 261
Query: 139 DMDKCVLCGHCEEICPAKAIKLE 161
C+ CG C + CP+ A++ E
Sbjct: 262 PEKHCINCGLCVDKCPSNALRFE 284
Score = 58.5 bits (140), Expect = 1e-13
Identities = 43/159 (27%), Positives = 61/159 (38%), Gaps = 39/159 (24%)
Query: 33 INPELCILCNRCLEVCPVTAIS----SNFPEVPDIDNKCVYCNTCVETCPVDA------- 81
+N +LC C C VCP+ I S P CV C C CP +A
Sbjct: 70 VNRKLCTGCGICKNVCPIDIIDIREDSTGKSYPT--GMCVMCGLCTTECPYNARLYFDPS 127
Query: 82 -IKITKTRVRVEQGNLIIE--------------------NRLKSKKLDYNRKKCVMCLVC 120
+K TK ++ +E+ + I + R + + KKCV C C
Sbjct: 128 SLKNTKNKMLMERYSTIFKMMGKTYEFPEPKHVKIVKPAERKLRHSISIDSKKCVECGKC 187
Query: 121 TKNCPFGAISESDDNISFDMDKCVLCGHCEEICPAKAIK 159
CP I E++ +D C C C E+CP AI+
Sbjct: 188 IYLCPKDTIIEAEM-----VDGCTRCNICNEVCPVDAIE 221
Score = 53.5 bits (127), Expect = 5e-12
Identities = 43/168 (25%), Positives = 52/168 (30%), Gaps = 63/168 (37%)
Query: 38 CILCNRCLEVCPVTAISSNFPEVPDIDNK-CVYCNTCVETCPVDAIKITKTRVRVEQGNL 96
CI C C + CP AI N ++ K C C C CP+D
Sbjct: 45 CITCGTCAKECPTGAIKKNEYGGYYVNRKLCTGCGICKNVCPID---------------- 88
Query: 97 IIENRLKSKKLDYNRKKCVMCLVCTKNCPFGAISESD----------------------- 133
II+ R S Y CVMC +CT CP+ A D
Sbjct: 89 IIDIREDSTGKSYPTGMCVMCGLCTTECPYNARLYFDPSSLKNTKNKMLMERYSTIFKMM 148
Query: 134 -----------------------DNISFDMDKCVLCGHCEEICPAKAI 158
+IS D KCV CG C +CP I
Sbjct: 149 GKTYEFPEPKHVKIVKPAERKLRHSISIDSKKCVECGKCIYLCPKDTI 196
Score = 47.0 bits (110), Expect = 4e-10
Identities = 28/105 (26%), Positives = 43/105 (40%), Gaps = 25/105 (23%)
Query: 57 FPEVPDIDNKCVYCNTCVETCPVDAIKITKTRVRVEQGNLIIENRLKSKKLDYNRKKCVM 116
+ E D NK + + C+E CP +AIK+ +D C+
Sbjct: 12 YEECEDCKNKEI--SKCMEVCPTNAIKM----------------------IDGKAFSCIT 47
Query: 117 CLVCTKNCPFGAISESD-DNISFDMDKCVLCGHCEEICPAKAIKL 160
C C K CP GAI +++ + C CG C+ +CP I +
Sbjct: 48 CGTCAKECPTGAIKKNEYGGYYVNRKLCTGCGICKNVCPIDIIDI 92
Score = 43.5 bits (101), Expect = 5e-09
Identities = 20/57 (35%), Positives = 27/57 (47%), Gaps = 4/57 (7%)
Query: 31 IEINPELCILCNRCLEVCPVTAISSNFPEVPDIDNKCVYCNTCVETCPVDAIKITKT 87
I + + C+ C C +CP AI KC YC+ CV CP AI+I +T
Sbjct: 423 IRTDNDYCVKCGLCTIICPNDAIDKGEINT----EKCEYCSACVNICPTRAIRIYRT 475
Score = 31.2 bits (69), Expect = 3e-05
Identities = 12/25 (48%), Positives = 16/25 (64%)
Query: 29 NKIEINPELCILCNRCLEVCPVTAI 53
+K EIN E C C+ C+ +CP AI
Sbjct: 446 DKGEINTEKCEYCSACVNICPTRAI 470