Pairwise Alignments

Query, 161 a.a., 4Fe-4S binding protein from Methanococcus maripaludis JJ

Subject, 132 a.a., 4Fe-4S binding protein from Methanococcus maripaludis S2

 Score = 52.0 bits (123), Expect = 4e-12
 Identities = 22/57 (38%), Positives = 35/57 (61%), Gaps = 1/57 (1%)

Query: 105 KKLDYNRKKCVMCLVCTKNCPFGAISESDD-NISFDMDKCVLCGHCEEICPAKAIKL 160
           K +  + +KC+ C  C  +CP GA+S  ++  I  D D+C+ C +C +ICP  AIK+
Sbjct: 73  KIIQKDDEKCIDCGACVVHCPVGALSVDEEFKILLDEDECIGCKNCAKICPVNAIKI 129



 Score = 46.6 bits (109), Expect = 2e-10
 Identities = 31/85 (36%), Positives = 44/85 (51%), Gaps = 12/85 (14%)

Query: 2   IDMVSKILKKYFDNLDIKFELDSQYISNKIEINPELCILCNRCLEVCPVTAIS--SNFPE 59
           I+   +ILKK+ +  DI            I+ + E CI C  C+  CPV A+S    F  
Sbjct: 55  IEKSIEILKKFGEAEDIP---------KIIQKDDEKCIDCGACVVHCPVGALSVDEEFKI 105

Query: 60  VPDIDNKCVYCNTCVETCPVDAIKI 84
           + D D +C+ C  C + CPV+AIKI
Sbjct: 106 LLDED-ECIGCKNCAKICPVNAIKI 129



 Score = 30.0 bits (66), Expect = 2e-05
 Identities = 24/94 (25%), Positives = 42/94 (44%), Gaps = 11/94 (11%)

Query: 68  VYCNTCVETCPVDAIKITKTRVRVEQGNLIIENRLKSKKLDYNRKKCVMCLVCTKNCPFG 127
           V  N  +ET  +  + I K ++   +G LI+E     ++++    K +  L       FG
Sbjct: 18  VVSNVVLETGVM--VNILKAKMEPREGFLILELTGDEEQIE----KSIEILK-----KFG 66

Query: 128 AISESDDNISFDMDKCVLCGHCEEICPAKAIKLE 161
              +    I  D +KC+ CG C   CP  A+ ++
Sbjct: 67  EAEDIPKIIQKDDEKCIDCGACVVHCPVGALSVD 100