Pairwise Alignments

Query, 161 a.a., 4Fe-4S binding protein from Methanococcus maripaludis JJ

Subject, 397 a.a., 4Fe-4S binding protein from Methanococcus maripaludis S2

 Score = 67.8 bits (164), Expect = 2e-16
 Identities = 36/125 (28%), Positives = 57/125 (45%), Gaps = 9/125 (7%)

Query: 36  ELCILCNRCLEVCPVTAISSNFPEVPDIDNKCVYCNTCVETCPVDAIKITKTRVRVEQGN 95
           E C+ C  C+  CPV A+S    +     + C+YC+ C +TCP +AI +   +      N
Sbjct: 133 EDCVGCGVCISECPVGALSIEGEKAVVDKDSCIYCSICAQTCPWNAIFVAGKKSPKRDKN 192

Query: 96  LIIENRLKSKKLDYNRKKCVMCLVCTKNCPFGAISESDDNISFDMDKCVLCGHCEEICPA 155
           ++        K   +   C+ C  CT  CP   I   ++ ++     C  CG C+  CP 
Sbjct: 193 IV--------KFSVDSDLCIGCGDCTDKCPRDLI-VLNEMVAVPPKGCPACGLCKAACPV 243

Query: 156 KAIKL 160
            AI+L
Sbjct: 244 DAIEL 248



 Score = 66.6 bits (161), Expect = 4e-16
 Identities = 43/140 (30%), Positives = 61/140 (43%), Gaps = 11/140 (7%)

Query: 19  KFELDSQYISNKIEINPELCILCNRCLEVCPVTAISSNFPEVPDIDNKCVYCNTCVETCP 78
           + EL+ + I  +I   P  C LC  C++VCP      N      +   CV C  CV+ CP
Sbjct: 51  EIELNGKTIK-QIAYFPTKCDLCGECVKVCPNNLKIEN----DKLKGFCVGCMKCVDACP 105

Query: 79  VDAIKITKTRVRVEQGNLIIENRLKSKKLDYNRKKCVMCLVCTKNCPFGAISESDDNISF 138
            D+    +  V   + N+ +     +   D     CV C VC   CP GA+S   +    
Sbjct: 106 -DSYVGMEGVVEPAKRNITLPKEPIAVTED-----CVGCGVCISECPVGALSIEGEKAVV 159

Query: 139 DMDKCVLCGHCEEICPAKAI 158
           D D C+ C  C + CP  AI
Sbjct: 160 DKDSCIYCSICAQTCPWNAI 179



 Score = 65.5 bits (158), Expect = 1e-15
 Identities = 43/152 (28%), Positives = 66/152 (43%), Gaps = 25/152 (16%)

Query: 27  ISNKIEINPELCILCNRCLEVCPVTAI------SSNFPEVPD----IDNKCVYCNTCVET 76
           ++  + + P+ C  C  C   CPV AI      +S  P   +     + KC YC  C   
Sbjct: 220 LNEMVAVPPKGCPACGLCKAACPVDAIELVVEYASPKPITDEGIVWDEEKCAYCGPCAIK 279

Query: 77  CPVDAIKITKTRVRVEQGNLIIENRLKSKKLDYNRKKCVMCLVCTKNCPFGAI------- 129
           CP +AI +      V    L + +R K++K +   K C+ C  C ++CP  A+       
Sbjct: 280 CPNNAITV------VNPKGLEMPSRKKTEKAN-EFKMCIRCGACVQSCPNDALRIGKIIH 332

Query: 130 -SESDDNISFDMDKCVLCGHCEEICPAKAIKL 160
             +  + I F  + C  CG C E CP   +KL
Sbjct: 333 NGKEYERIEFSPNLCDSCGKCIETCPYDMLKL 364



 Score = 63.9 bits (154), Expect = 3e-15
 Identities = 40/131 (30%), Positives = 55/131 (41%), Gaps = 20/131 (15%)

Query: 31  IEINPELCILCNRCLEVCPVTAISSNFPEVPDIDNKCVYCNTCVETCPVDAIKITKTRVR 90
           I+IN E C +C  C   CP  A+  N  +V      C  C  CV  CP DA+ + +  + 
Sbjct: 2   IKINTEDCYMCKACENSCPTEALKLNPFKV------CQLCGNCVNVCPNDALNLREIEL- 54

Query: 91  VEQGNLIIENRLKSKKLDYNRKKCVMCLVCTKNCPFGAISESDDNISFDMDKCVLCGHCE 150
                    N    K++ Y   KC +C  C K CP     E+D    F    CV C  C 
Sbjct: 55  ---------NGKTIKQIAYFPTKCDLCGECVKVCPNNLKIENDKLKGF----CVGCMKCV 101

Query: 151 EICPAKAIKLE 161
           + CP   + +E
Sbjct: 102 DACPDSYVGME 112



 Score = 48.1 bits (113), Expect = 2e-10
 Identities = 26/97 (26%), Positives = 39/97 (40%), Gaps = 26/97 (26%)

Query: 36  ELCILCNRCLEVCPVTAI--------SSNFPEVPDIDNKCVYCNTCVETCPVDAIKITKT 87
           ++CI C  C++ CP  A+           +  +    N C  C  C+ETCP D +K+T  
Sbjct: 308 KMCIRCGACVQSCPNDALRIGKIIHNGKEYERIEFSPNLCDSCGKCIETCPYDMLKLTGK 367

Query: 88  RVRVEQGNLIIENRLKSKKLDYNRKKCVMCLVCTKNC 124
             +  +G                   CVMCL C + C
Sbjct: 368 SEKPLEG------------------FCVMCLKCIEAC 386



 Score = 44.3 bits (103), Expect = 2e-09
 Identities = 16/48 (33%), Positives = 24/48 (50%)

Query: 30  KIEINPELCILCNRCLEVCPVTAISSNFPEVPDIDNKCVYCNTCVETC 77
           +IE +P LC  C +C+E CP   +         ++  CV C  C+E C
Sbjct: 339 RIEFSPNLCDSCGKCIETCPYDMLKLTGKSEKPLEGFCVMCLKCIEAC 386