Pairwise Alignments

Query, 161 a.a., 4Fe-4S binding protein from Methanococcus maripaludis JJ

Subject, 205 a.a., 4Fe-4S binding protein from Methanococcus maripaludis S2

 Score = 80.5 bits (197), Expect = 2e-20
 Identities = 40/135 (29%), Positives = 61/135 (45%), Gaps = 26/135 (19%)

Query: 29  NKIEINPELCILCNRCLEVCPVTAISSNFP--EVPDIDNKCVYCNTCVETCPVDAIKITK 86
           N+  ++PE CI C  C   C +  + +  P   VP++  +C  C  C++ CP  AI    
Sbjct: 89  NRFSVDPEKCIKCGVCSIFCTIPILKNEIPVLNVPEVTTECNNCKLCIQKCPQKAISF-- 146

Query: 87  TRVRVEQGNLIIENRLKSKKLDYNRKKCVMCLVCTKNCPFGAISESDDN-----ISFDMD 141
                E G + I +            KC +CL C + CP  A+    ++     I  D++
Sbjct: 147 -----EDGKISINS------------KCNLCLKCVEFCPLNALKSPKESLKSKIIKVDLN 189

Query: 142 KCVLCGHCEEICPAK 156
            C+ C  CEEICP K
Sbjct: 190 SCIFCKDCEEICPVK 204



 Score = 77.8 bits (190), Expect = 1e-19
 Identities = 57/169 (33%), Positives = 78/169 (46%), Gaps = 27/169 (15%)

Query: 7   KILKKYFDNLDIKFELDSQYISNKIEINPEL--CILCNRCLEVCPVTAIS-SNFPEVPDI 63
           K LK  F NL   ++ + + I      NPEL  CI C  C++VCP  AIS   F ++   
Sbjct: 16  KFLKNIFFNLFRSYK-NPEVIGETT--NPELDDCICCGLCVDVCPTNAISVFKFRDI--- 69

Query: 64  DNKCVYCNTCVETCPVDAIKITKTRVRVEQGNL-------------IIENRLKSKKLDYN 110
              C +C  C+  CPVDAI+  K R  V+                 I++N +    +   
Sbjct: 70  --ICEHCGACLNVCPVDAIE--KNRFSVDPEKCIKCGVCSIFCTIPILKNEIPVLNVPEV 125

Query: 111 RKKCVMCLVCTKNCPFGAISESDDNISFDMDKCVLCGHCEEICPAKAIK 159
             +C  C +C + CP  AIS  D  IS +  KC LC  C E CP  A+K
Sbjct: 126 TTECNNCKLCIQKCPQKAISFEDGKISIN-SKCNLCLKCVEFCPLNALK 173



 Score = 31.2 bits (69), Expect = 1e-05
 Identities = 9/22 (40%), Positives = 15/22 (68%)

Query: 139 DMDKCVLCGHCEEICPAKAIKL 160
           ++D C+ CG C ++CP  AI +
Sbjct: 42  ELDDCICCGLCVDVCPTNAISV 63



 Score = 27.3 bits (59), Expect = 2e-04
 Identities = 10/23 (43%), Positives = 14/23 (60%)

Query: 28  SNKIEINPELCILCNRCLEVCPV 50
           S  I+++   CI C  C E+CPV
Sbjct: 181 SKIIKVDLNSCIFCKDCEEICPV 203