Pairwise Alignments

Query, 161 a.a., 4Fe-4S binding protein from Methanococcus maripaludis JJ

Subject, 510 a.a., alpha-hydroxy-acid oxidizing protein from Methanococcus maripaludis S2

 Score = 46.2 bits (108), Expect = 8e-10
 Identities = 20/56 (35%), Positives = 28/56 (50%)

Query: 30 KIEINPELCILCNRCLEVCPVTAISSNFPEVPDIDNKCVYCNTCVETCPVDAIKIT 85
          K+ ++PE C+LC RC   C          ++    N+C  C  CV  CP DAI +T
Sbjct: 11 KVFVDPERCMLCERCTTECSWGVYRRQGNKILTYPNRCGACLRCVSLCPRDAITVT 66



 Score = 37.0 bits (84), Expect = 5e-07
 Identities = 15/53 (28%), Positives = 26/53 (49%)

Query: 106 KLDYNRKKCVMCLVCTKNCPFGAISESDDNISFDMDKCVLCGHCEEICPAKAI 158
           K+  + ++C++C  CT  C +G      + I    ++C  C  C  +CP  AI
Sbjct: 11  KVFVDPERCMLCERCTTECSWGVYRRQGNKILTYPNRCGACLRCVSLCPRDAI 63



 Score = 28.1 bits (61), Expect = 2e-04
 Identities = 12/26 (46%), Positives = 15/26 (57%)

Query: 29 NKIEINPELCILCNRCLEVCPVTAIS 54
          NKI   P  C  C RC+ +CP  AI+
Sbjct: 39 NKILTYPNRCGACLRCVSLCPRDAIT 64



 Score = 24.3 bits (51), Expect = 0.003
 Identities = 16/65 (24%), Positives = 22/65 (33%), Gaps = 18/65 (27%)

Query: 66  KCVYCNTCVETCPVDAIKITKTRVRVEQGNLIIENRLKSKKLDYNRKKCVMCLVCTKNCP 125
           +C+ C  C   C     +         QGN I+              +C  CL C   CP
Sbjct: 18  RCMLCERCTTECSWGVYR--------RQGNKILTYP----------NRCGACLRCVSLCP 59

Query: 126 FGAIS 130
             AI+
Sbjct: 60  RDAIT 64