Pairwise Alignments

Query, 281 a.a., protein translocase subunit SecF from Methanococcus maripaludis JJ

Subject, 315 a.a., protein-export membrane protein SecF (NCBI ptt file) from Shewanella oneidensis MR-1

 Score = 77.4 bits (189), Expect = 4e-19
 Identities = 69/259 (26%), Positives = 118/259 (45%), Gaps = 16/259 (6%)

Query: 8   LTIIPIILALLSLTLVSVNGLKESIDVSGGTEISILAPANTDLSVLKEQLPDSEVKI--- 64
           ++I+  +L L S+ L++  GL   +D +GGT + +      DL+  + QL   E      
Sbjct: 20  VSIMSAVLVLGSIVLLATKGLNWGLDFTGGTVVEMSFSTPVDLNQFRSQLTTPETSSAVV 79

Query: 65  ----SESSIGTFVVIKSGLETDVDSVRAVVKGFFNVQDLSELSYTEKQIGSVLSSKFWEE 120
               S   +   + +K G+ +DV  V  V   F    D + +    + +G  +  +  E+
Sbjct: 80  QNYGSSRDVLVRLPVKEGISSDVQVVEIVK--FAQQLDPNVVQKRVEFVGPQVGKELAEQ 137

Query: 121 GMKAVGFAFIFMAIVVYAIFRTPVPSAAVILAAASDMAIALGGMSLFNIPISTATIAALL 180
           G  AV  A I + I +   F   + + AV  A A D+ + LG  SL  +      +A +L
Sbjct: 138 GGLAVLVALICIMIYIAFRFEWRLATGAVA-ALAHDVMVTLGVFSLTQMEFDLTVLAGVL 196

Query: 181 MLVGYSVDTDIMLTTRV----LKRRSGTLDERIAGAMKTGITMSLTTIFAMAVLYLVVTF 236
            +VGYS++  I++  RV    LK R    +E +  ++    TMS T I     L +VV  
Sbjct: 197 TVVGYSLNDTIVVFDRVRENFLKMRKSEPEEVVNVSITQ--TMSRTIITMGTTLVVVVAL 254

Query: 237 VVPAADVLANIAAVLLIGL 255
            +    ++   AA LL+G+
Sbjct: 255 FLSGGSMIHGFAAALLLGI 273