Pairwise Alignments

Query, 460 a.a., MATE family efflux transporter from Methanococcus maripaludis JJ

Subject, 445 a.a., MATE family efflux transporter from Vibrio cholerae E7946 ATCC 55056

 Score =  127 bits (319), Expect = 7e-34
 Identities = 97/447 (21%), Positives = 221/447 (49%), Gaps = 13/447 (2%)

Query: 16  KAIVKISLPMVIAMSFQSLYNIIDAIWVAG-LGSDALAAIGLFFPFMFALIAISNGVGIG 74
           +  V+ ++P V AM    LY ++D I++   +G++ LA I + +P +  ++ I   VG+G
Sbjct: 8   RQFVRYTIPTVAAMLVNGLYQVVDGIFIGHYVGAEGLAGINVAWPVIGTILGIGMLVGVG 67

Query: 75  GSSAISRRIGQKNKDAADNIAVHSIVLGIILGILLTGVIPFLGTIF-SLIGASGNTVTMA 133
             +  S + G+ + D+A  I    ++  ++L  ++  ++ F+   F    GA G    + 
Sbjct: 68  TGALASIKQGEGHPDSAKRILATGLMSLLLLAPIVAVILWFMADDFLRWQGAEGRVFELG 127

Query: 134 VEYSTILFGGAVALLFTNIANAILRGEGDTKRAMYAIILGSVLNIVLDPIFIYVLNMGVA 193
           ++Y  +L  G +  L +     +LR +     A   +++G++ NI LD +FI  L   + 
Sbjct: 128 LQYLQVLIVGCLFTLGSIAMPFLLRNDHSPNLATLLMVIGALTNIALDYLFIAWLQWELT 187

Query: 194 GAAWATLLSLVITGILFVYWLFIKKDTFLKISFEKFKLDINIIKEIFSIGLPASISHLTM 253
           GAA AT L+ V+  +L + + F  +   ++++    +L+ + + +IF+IG+ +   +   
Sbjct: 188 GAAIATTLAQVVVTLLGLAYFFSARAN-MRLTRRCLRLEWHSLPKIFAIGVSSFFMYAYG 246

Query: 254 AFSMFLLTAIVAKAGGNDGIAVFSTGWRIVSMGTIPLVGLATGVTVVTGAAYGSANPEKL 313
           +  + L   ++ + G    +  ++    IV++  + + G+A G+  +    +G+ N + +
Sbjct: 247 STMVALHNTLMIEYGNAVMVGAYAVMGYIVTIYYLTVEGIANGMQPLASYHFGARNYDHI 306

Query: 314 EISYKYALKMGILVETIIAALILIFENQITYLFTYSENSVHILEGLLVFLK-YMFLFYPT 372
               + A+ + +L       ++ +F  Q   +F  S++   ++ G  + +K ++F  Y  
Sbjct: 307 RKLLRLAMGIAVLGGMAFVLVLNLFPEQAIAIFNSSDS--ELIAGAQMGIKLHLFAMYLD 364

Query: 373 LPLGMLTAAMFQGVSKGNNSLFISLLRTIILQIPMAYTFGIIFNQGLTGVWFGMILGHVI 432
             L +++AA +Q  ++G  ++FI+ +  + + +P  +     F  GLTGVW  + + +++
Sbjct: 365 GFL-VVSAAYYQSTNRGGKAMFIT-VGNMSIMLPFLFILPQFF--GLTGVWIALPISNIV 420

Query: 433 AVSIAYLLGIYTIRQFKATLTPETVKF 459
              ++ ++GI   R       P  V +
Sbjct: 421 ---LSTVVGIMLWRDVNKMGKPTQVSY 444