Pairwise Alignments
Query, 788 a.a., CDC48 family AAA ATPase from Methanococcus maripaludis JJ
Subject, 651 a.a., ATP-dependent zinc metalloprotease FtsH from Vibrio cholerae E7946 ATCC 55056
Score = 203 bits (517), Expect = 2e-56
Identities = 99/227 (43%), Positives = 154/227 (67%), Gaps = 2/227 (0%)
Query: 506 WSDVGGLEDIKQDLKEAVEWPIKNKEMFERMGIRPPKGVLLFGPPGTGKTLLAKAVANES 565
+SDV G ++ K+D+KE V++ +++ F+++G + P GVL+ GPPGTGKTLLAKA+A E+
Sbjct: 155 FSDVAGCDEAKEDVKELVDY-LRDPSRFQKLGGKIPTGVLMVGPPGTGKTLLAKAIAGEA 213
Query: 566 EANFISVKGPEIFSKWVGESEKAIREIFRKARQAAPTVIFFDEIDSVAPKRGMDFGSS-G 624
+ F ++ G + +VG +R++F +A++A+P +IF DEID+V +RG G
Sbjct: 214 KVPFFTISGSDFVEMFVGVGASRVRDMFEQAKKASPCIIFIDEIDAVGRQRGAGVGGGHD 273
Query: 625 VTEKVVNQLLTELDGLEEPKDVVIIAATNRPDILDQALLRPGRLDRIVLVPIPNETARLE 684
E+ +NQ+L E+DG E + +++IAATNRPD+LD ALLRPGR DR V+V +P+ R +
Sbjct: 274 EREQTLNQMLVEMDGFEGNEGIIVIAATNRPDVLDPALLRPGRFDRQVVVGLPDVRGREQ 333
Query: 685 IFKVHTKGMPIGKDVNLEKLAKETKGYTGADIEAVCREAAMIALREN 731
I KVH + +P+ DV +A+ T G++GAD+ + EAA+ A R N
Sbjct: 334 ILKVHMRKVPLANDVEPSLIARGTPGFSGADLANLVNEAALFAARGN 380
Score = 182 bits (461), Expect = 7e-50
Identities = 92/199 (46%), Positives = 131/199 (65%), Gaps = 4/199 (2%)
Query: 175 TYEDIGGLKEEVKKIREMVELPMRYPELFDKLGIEPPKGVLLAGPPGTGKTLLAKAVANE 234
T+ D+ G E + ++E+V+ +R P F KLG + P GVL+ GPPGTGKTLLAKA+A E
Sbjct: 154 TFSDVAGCDEAKEDVKELVDY-LRDPSRFQKLGGKIPTGVLMVGPPGTGKTLLAKAIAGE 212
Query: 235 AGANFYTINGPEIMSKYVGETEENLRKIFEEAEENSPSIIFIDEIDAVAPKRDEASG--- 291
A F+TI+G + + +VG +R +FE+A++ SP IIFIDEIDAV +R G
Sbjct: 213 AKVPFFTISGSDFVEMFVGVGASRVRDMFEQAKKASPCIIFIDEIDAVGRQRGAGVGGGH 272
Query: 292 EVERRMVAQLLTLMDGLESRGQLVILAATNRPDSIDMALRRPGRLDREITIGIPDRHGRN 351
+ + + Q+L MDG E ++++AATNRPD +D AL RPGR DR++ +G+PD GR
Sbjct: 273 DEREQTLNQMLVEMDGFEGNEGIIVIAATNRPDVLDPALLRPGRFDRQVVVGLPDVRGRE 332
Query: 352 EILQIHTRNMPLQPDYEKS 370
+IL++H R +PL D E S
Sbjct: 333 QILKVHMRKVPLANDVEPS 351