Pairwise Alignments

Query, 92 a.a., helix-turn-helix transcriptional regulator from Methanococcus maripaludis JJ

Subject, 120 a.a., helix-turn-helix transcriptional regulator from Methanococcus maripaludis S2

 Score = 81.3 bits (199), Expect = 3e-21
 Identities = 41/86 (47%), Positives = 63/86 (73%), Gaps = 2/86 (2%)

Query: 1  MINKKHVKEILYLLNSVEELYFAEICNNIPEAHKGSINRTLQELYDFKMVSKRE-EGTAK 59
          ++ KK+V+EIL ++   EELYF+EI NN+ + H+GS+ R L E+ ++ ++SKRE E   K
Sbjct: 5  LLAKKYVREILEMIEENEELYFSEIMNNL-DTHQGSVGRLLSEMVEYDLLSKREDEEGKK 63

Query: 60 LSKTFYSITDLGKESLKFYELEKEVE 85
          L+KT+YSIT+ GK +LK YE   ++E
Sbjct: 64 LNKTYYSITEHGKLALKIYEYSDKLE 89