Pairwise Alignments

Query, 380 a.a., ABC transporter ATP-binding protein from Methanococcus maripaludis JJ

Subject, 343 a.a., ABC transporter ATP-binding protein from Vibrio cholerae E7946 ATCC 55056

 Score =  188 bits (477), Expect = 2e-52
 Identities = 97/221 (43%), Positives = 143/221 (64%), Gaps = 3/221 (1%)

Query: 27  LKS-KFSIDSGSIIVLFGRSGSGKTSTLGCIAGLLDPDNGKIIVNNEIYYDSDKNINMPP 85
           LKS    ++ G I+ L G SG GKT+ L  IAGLL   +G++ +N     D  + +  PP
Sbjct: 20  LKSLSLQVNPGEIVCLLGASGCGKTTLLKAIAGLLPLASGQLSLNCVTLDDGKRWL--PP 77

Query: 86  QERNLGYVFQNYALFPHLTVKENIEYGIKHLSEEEKEKRVSDLLVLTQIEGLENRYPDQI 145
           ++RN+G +FQ+YALFPHLTV +N+ +G+  +  ++KE +++++L L  ++    RYP Q+
Sbjct: 78  EQRNIGMIFQDYALFPHLTVAQNVGFGLDAMPAKQKEAKIAEMLALVHLDAFAERYPHQL 137

Query: 146 SGGQKQRVALARALAPSPKILLLDEPFSALDMISRMRLRESLRSIQKELKIPVVFVTHSF 205
           SGGQ+QRVA+ARALA  P +LLLDEPFS +D   R  L   +R I K+  +  +FVTHS 
Sbjct: 138 SGGQQQRVAIARALAYKPDLLLLDEPFSNIDTQVRHELIIEIRKIFKQQGVTAIFVTHSR 197

Query: 206 EEAFVMAEKVVTFHNGRIQQIGTPEEIFYNPINTNVAQLVG 246
           EEAF  A+K+   + G I+Q GT  E++Y P +  VA  +G
Sbjct: 198 EEAFAFADKMAVMNRGVIEQYGTAAELYYQPSSQFVADFLG 238