Pairwise Alignments

Query, 380 a.a., ABC transporter ATP-binding protein from Methanococcus maripaludis JJ

Subject, 368 a.a., polyamine ABC transporter, ATP-binding protein (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

 Score =  196 bits (498), Expect = 9e-55
 Identities = 125/352 (35%), Positives = 208/352 (59%), Gaps = 14/352 (3%)

Query: 10  NYYESKKLKKNKNPSFNLKS-KFSIDSGSIIVLFGRSGSGKTSTLGCIAGLLDPDNGKII 68
           N  E + + KN   +  L +    I +G  + L G SG GKT+ L  I+G   PD G I 
Sbjct: 6   NIIELRGVTKNFEDTCALDNIDLEIRNGEFLTLLGPSGCGKTTILRLISGFEKPDAGVIT 65

Query: 69  VNNEIYYDSDKNINMPPQERNLGYVFQNYALFPHLTVKENIEYGIK--HLSEEEKEKRVS 126
           +  +   D+      PP+ R +  VFQNYALFPH++V+EN+ +G++     ++E  +RV 
Sbjct: 66  LKGQRMDDA------PPEARQVNTVFQNYALFPHMSVRENVGFGLRMQRRPKDEIARRVH 119

Query: 127 DLLVLTQIEGLENRYPDQISGGQKQRVALARALAPSPKILLLDEPFSALDMISRMRLRES 186
           D L +  +E   +R P Q+SGGQ+QRVA+ARA+  +P +LLLDEPFSALD   R +++  
Sbjct: 120 DALRMVHLEAHADRRPRQLSGGQQQRVAIARAVVNNPLVLLLDEPFSALDYKLRKQMQLE 179

Query: 187 LRSIQKELKIPVVFVTHSFEEAFVMAEKVVTFHNGRIQQIGTPEEIFYNPINTNVAQLVG 246
           ++ +Q++L I  VFVTH  EEAF M+++VV  ++G+I+QIG+P+EI+  P N  VA+ VG
Sbjct: 180 IKHLQRQLGITFVFVTHDQEEAFAMSDRVVVMNDGKIEQIGSPQEIYEEPANLYVARFVG 239

Query: 247 YINIFSNAEIDYNKNNPDF-SVLDYRDMKMSIKKFNKSMNEVSFGIRPENIKLIDINSEK 305
            INI  NA I  N  +  + +V++     +  ++     ++V+  +RPE++++  +  ++
Sbjct: 240 EINIL-NAVIAANHGDGLYDAVIEGVTFPIRSQRTFAPGDKVNVLLRPEDLRVYTLTEDR 298

Query: 306 TENV-FECIIKDVVNEGSTSLVYLEVIQNGLKLM-SKAQNDKFKKLNYAVGE 355
                    I++ V +G+T +  +  + +G +LM ++  N+    +NY  GE
Sbjct: 299 PAGPHLTGRIEESVYKGAT-VDLIVTLSDGRRLMAAEFFNEDDVDINYNPGE 349