Pairwise Alignments

Query, 925 a.a., right-handed parallel beta-helix repeat-containing protein from Methanococcus maripaludis JJ

Subject, 457 a.a., periplasmic copper-binding (RefSeq) from Shewanella loihica PV-4

 Score = 74.3 bits (181), Expect = 2e-17
 Identities = 72/331 (21%), Positives = 144/331 (43%), Gaps = 40/331 (12%)

Query: 70  NGIEINKSNIIID-LK----GNKLSGNYEGRGISISGNNVSLKNGIVSNFDYGIVLENAE 124
           N + +  S + I+ LK    G+ L+    G     S + + ++   +    +GI L+  +
Sbjct: 103 NALLLQSSKVTIERLKIVNWGDDLTAQDAGIYSDQSASELVIRENRLQGDGFGIWLQKGK 162

Query: 125 NCKISNNEVFGN-------TYDGIYILNSKNNDISENLVYENGVIGIVTSGIFLDGSEFN 177
             K+ +N + GN         +GI +   +N ++S+N V +         GI++  S+ N
Sbjct: 163 EIKVHHNRIQGNPGLRSADRGNGIQLSIVQNVEVSDNEVNQ------TRDGIYIISSQHN 216

Query: 178 NITKNTVNNNIYNGIELLNSKNNLISGNTVFENEDNGVFVWDSKNNSIIFNELYQNENNG 237
            I  NT++N  Y GI  + S +N +  N  ++    G  +  S+  ++  NE   +++ G
Sbjct: 217 TIKNNTMHNLRY-GIHYMYSHSNRVQDNLAYDTR-AGYALMSSRQLTVSGNESRDSQDYG 274

Query: 238 ILTRESEFNNIESNNIFENDDSGIYSWKSFENTISKNKISKNSEGIILWNSDLNVLFKNR 297
            L     ++ I  N I+         W   EN +    + +  +G+ ++NS  N +  N 
Sbjct: 275 FLMNFITYSEISHNRIYR-------VWTKPENKV----LGREGKGLFVYNSAYNSINHN- 322

Query: 298 LLNNVKSGIFMEFGTKYNTIYDNLF-NNSLNVRFEDSGENYWNAPIINESNILEGEFTAG 356
           L++  + GI +  G+++  ++ N F NN + V++  + +  W       S    G F + 
Sbjct: 323 LIDTAEIGIHLTAGSEHTKVFGNSFINNPVQVKYVANRQAEW-------SQDGRGNFWSN 375

Query: 357 NVWYTPEGTGFSQKAMNQDSNGDTLSETYYE 387
            + +  +  GF  +    +   D L   Y E
Sbjct: 376 YLGWDLDNDGFGDRPFEPNDGIDKLIWQYPE 406