Pairwise Alignments

Query, 528 a.a., S-layer protein from Methanococcus maripaludis JJ

Subject, 447 a.a., S-layer protein from Methanococcus maripaludis S2

 Score = 73.9 bits (180), Expect = 1e-17
 Identities = 92/359 (25%), Positives = 149/359 (41%), Gaps = 68/359 (18%)

Query: 201 GKDMVYASIVYPNQVSAFKLTKDLKEGYEIPFLGKKYRIVQINEDDNIIYLGTASYDGTL 260
           G+ + Y +  Y  ++ +        EG E+ F+GK Y++++ +ED+ I+         T 
Sbjct: 98  GESVTYKNFEYEEEIESDD------EGDEVTFMGKTYKLIEYDEDEKIVLGNKVEDIDTT 151

Query: 261 EQGNYISSGDYQIVLGEILESGDEYSVEISILRNGNIIEEHTEILRSDKSFSVIAGDLGV 320
           E+ +Y       I   +I+       V +S+    + IE + ++   D  F  ++G    
Sbjct: 152 EEFSY------DIYTFKIIGKDSTGEVLVSVYEGTDRIE-NVKMYPDDTYF--VSGSTVS 202

Query: 321 TVHDVWTNAAADTGYADITICRSLTELELGE-------------------EYVN------ 355
             +D +  +  DT Y    I  SL E E G+                   EY N      
Sbjct: 203 IYYDEYLESG-DTAYFFFEIYDSL-EFEDGKSISGYSDFDTEIDGQTITLEYDNPKSLSE 260

Query: 356 -----NWEVRAVTNTGGTIDFLKTYEDNTVGIALVYAGSDIEGINDGDRIKIADYVNLVF 410
                N++V  V   G  +    T   N     L Y     EG         A  V L  
Sbjct: 261 NFGLLNYKVNLVDVNGEDLTAFFTVTQN-----LNYEYDMDEGTKYFGNNIFA--VKLEN 313

Query: 411 DDEDDLDKMVAEFKAERTVTTGSTGGTVISKSGEVPKIIMDDEIKLDEADKNLILIGGPV 470
           D+EDD D  +  +K  +          ++   G V  +   D+ +L  A  +LILIGGPV
Sbjct: 314 DEEDDWDDELYLYKNNKKYDK------IVDYQGSVQLV---DQDELLSASSDLILIGGPV 364

Query: 471 ANKLTKELQNEGKIYIDNESPATA-SLIEGAANGNN----VLVIAGGDRYSTESAVLSL 524
           +NK+T+ +QN   I + N+ P     +I+   N NN    +LV+AG DR  T++ VL+L
Sbjct: 365 SNKVTESIQNSLNIEVTNDYPGEGKGVIQTITNPNNAESTILVLAGSDREGTKACVLAL 423