Pairwise Alignments

Query, 462 a.a., nitrogenase molybdenum-iron protein subunit beta from Methanococcus maripaludis JJ

Subject, 519 a.a., nitrogenase molybdenum-iron protein subunit beta from Rhodopseudomonas palustris CGA009

 Score =  284 bits (726), Expect = 6e-81
 Identities = 162/450 (36%), Positives = 244/450 (54%), Gaps = 24/450 (5%)

Query: 14  VINPIVTCQPLGAMYAVSGIERGMPLVHGSQGCSTFVRYGFARHFREPADIAVTSLHEDA 73
           VINP   CQPLGA++A  G E+ +P VHGSQGC  + R  F RHF+EP     +S+ EDA
Sbjct: 63  VINPAKACQPLGAVFAAVGFEKTLPFVHGSQGCVAYYRSHFTRHFKEPTSCVSSSMTEDA 122

Query: 74  AVFGGRKNLISGLGNLAARFKPDVMGVVTTCSSEIIGDDVAGFIKTAKVEIAKKMGEEAA 133
           AVFGG  N+I GL N  A +KP ++ V TTC +E+IGDD+  FIK AK +          
Sbjct: 123 AVFGGLNNMIDGLANAYALYKPKMIAVSTTCMAEVIGDDLNAFIKNAKEK------GSVP 176

Query: 134 SKIKIVQINTPSFVEHQFKGYDNAIKAIVD--------TLAEPKDEENGKLNIIPGI--V 183
            +  +   +TP+FV     GYDN +K IV+        T+ + + + N  +N + G    
Sbjct: 177 QEFDVTYAHTPAFVGSHITGYDNTMKGIVEHFWDGKSGTVEKLERKPNESINFLGGFDGY 236

Query: 184 NPGDIREIKHMLSLMGVEGILLTDTSDPFDSPLRPSKADKNPYYQKGGTPLADIQDCANS 243
             G+IREIK +  LMGV+  +  D SD +D+P     AD       GGT L    +  ++
Sbjct: 237 TVGNIREIKRIFELMGVDYTIFGDNSDVWDTP-----ADGEFRMYDGGTTLEQAANAVHA 291

Query: 244 LGTISLANYASSAPASLEKKYNMPSKVSEAPIGIQNTDSFIRTVKKFTGNDVTDEILDER 303
             TIS+  + +    +    +         P+GI  TD F++ V + TG  + + +  ER
Sbjct: 292 KATISMQEFCTEKTLATIADHGQEVVAFNHPVGIAGTDRFLQAVSRITGKAIPEALTKER 351

Query: 304 GIVIDAMADVASRYLFGRKVAIYGDPSITVGMARFVAELGMIPKVVCTGVKNEYFVNDLK 363
           G ++DA+ D +S ++ G+K AIYGDP +  G+A F+ ELG  P  +     N+ +   ++
Sbjct: 352 GRLVDAIGD-SSAHIHGKKFAIYGDPDLCYGLAEFILELGGEPVHILATNGNKAWEAKVQ 410

Query: 364 KVAKES--DEDIDALFGQDLRALDVYLKENPVDLMIGSSDGRLMAKDLGIPLYRVGYPVY 421
            +   S          G+DL  L   L   PVD MIG++ G+ + +D G PL R+G+PV+
Sbjct: 411 ALLDSSPFGAGCKVYAGKDLWHLRSLLFTEPVDFMIGNTYGKYLERDTGTPLIRLGFPVF 470

Query: 422 DRVGYQRRPIIGYNGALNLVDGITNTILDK 451
           DR  + R P+ GY G++N++  I + I D+
Sbjct: 471 DRHHHHRSPVWGYQGSMNVLVKILDKIFDE 500