Pairwise Alignments

Query, 295 a.a., glycine betaine ABC transporter substrate-binding protein from Methanococcus maripaludis JJ

Subject, 307 a.a., choline ABC transporter substrate-binding protein from Pseudomonas aeruginosa PA14

 Score =  134 bits (337), Expect = 3e-36
 Identities = 75/266 (28%), Positives = 126/266 (47%), Gaps = 5/266 (1%)

Query: 29  DDTEKGTIKFGLPPWPGVTVKSNVVKVILEEQGYNVELNQLDAGITYAKLADGDLDVSLA 88
           +D     ++   P W  + V +     +LE  GY V+++ L   I Y  L DG +D  L 
Sbjct: 23  EDPACARVRLADPGWSDIAVTNATAAFLLESLGYQVKIDTLSVPIIYGGLRDGQVDAFLG 82

Query: 89  GWLPTTHEEYWTQY--GNQLEMVHVNVGKTALGLAVPTYTYEAGIQSITDLNGNEELFDG 146
           GW+P  H++Y  ++    Q+E +  N+  T   LAVP Y ++AG+    DL    + F+ 
Sbjct: 83  GWMPA-HQDYHDKFVASGQVERLARNLDGTRFTLAVPRYVWDAGVHRFEDLAAQGQRFNR 141

Query: 147 KIIGIEPGAGIMSNTEKAIDS--YSLSGYELQSSSTPAMMAELARAINEDENIVVTVWEP 204
           K+ GI  GA    + +K ID+  + L  ++L  SS  AM+AEL RA      +V   W P
Sbjct: 142 KLYGIGSGAPANQSIQKMIDANQFGLGDWKLVESSEQAMLAELGRAEKRQRWLVFLGWTP 201

Query: 205 HSVFFKFDIKMLDDPEKVYGNGDKVYTIARTDFKDDYPEVYEFFQKFEVDPSVQSEWIYK 264
           H +  + D++ L+  E+ +G+  +VYT+AR  +    P           D  +++  +  
Sbjct: 202 HPMNIRHDLRYLEGGEQYFGDRGQVYTLARKGYAAQCPNPARLLANLRFDLDMENRLMSD 261

Query: 265 YSDEGMDPEEVAEEWVANNPELVANW 290
             +    P      W+  NP ++  W
Sbjct: 262 ALEGTATPASATRAWLKANPRVLEAW 287