Pairwise Alignments

Query, 441 a.a., diguanylate cyclase (GGDEF domain) with PAS/PAC sensor from Marinobacter adhaerens HP15

Subject, 482 a.a., diguanylate cyclase with PAS/PAC and GAF sensors (RefSeq) from Shewanella sp. ANA-3

 Score =  305 bits (782), Expect = 2e-87
 Identities = 175/431 (40%), Positives = 253/431 (58%), Gaps = 5/431 (1%)

Query: 11  KLVNLILDTIFVVDESSQIVFVSEACQRLLGYSPSEMIGTPLLNYIHPEDQERTLAAARR 70
           + V+L+LD I VVD++    FVS   +R+ GY+P EM+G  +L+ ++P D+ERTLAAA  
Sbjct: 28  QFVDLLLDAICVVDKTGHFEFVSAGAERIFGYTPDEMLGMQMLDLVYPPDRERTLAAAND 87

Query: 71  VMSGHTHTDFENRYLHRDGHAVHILWSARWSEEDRLRIAVARDVTALRRGDQTRNALYQI 130
           +M G    DFENRY+ +DG  V ILWSARWSE+ + RIAVARD+T  +  ++ + ALY+I
Sbjct: 88  IMEGRFKLDFENRYVRKDGTLVDILWSARWSEDRQQRIAVARDITKNKIAERRQAALYEI 147

Query: 131 SEAAHEAETLRDLCDGVHSIIGELFPESDLYLGFNQSHSGRLSLPDWRTKSGWIDWQVAP 190
           SEA H AE L  L   +H I+ +L P ++  +         L  P +R   G  +     
Sbjct: 148 SEAVHVAEDLLALYRHIHQIMAKLLPAANFAIALYDQDLNDLDFP-YRVGVGEQNRAQCA 206

Query: 191 GSAL--EDVIHTRKLSMAVRDPAHPGLGVHPKT-GSEVANWLGVPLVFHESTMGVLVIER 247
              L  E VI + + S+ +   A P      +   ++  +WLGVPL   +  +G L++  
Sbjct: 207 SFDLFTEQVIQSAE-SLLICPVAMPVSHAQEQDFQNQPISWLGVPLKLQKGIIGALIMHS 265

Query: 248 GTAAVSFDEADKSLLEFVATQVATVVERKRSEENLRFLAHHDGLTGLTNRSLFYDRLETA 307
              + ++ + D  L+EFV+TQ+A  +ER++    L  +A +D LT L NR LFYDR + A
Sbjct: 266 TPDSRAYTKQDCELVEFVSTQIAFAIERRQMLARLEHIALYDQLTHLPNRELFYDRFQKA 325

Query: 308 LRSASRNEGRLALLYLDVNDFKQINDTLGHEAGDELLIEMAQRLRDCTRGTDTVARMGGD 367
           L  A+R     +LLYLD++ FK +NDT GH  GD LL   AQR+  C R +DTVAR GGD
Sbjct: 326 LSRANRESSYFSLLYLDLDKFKWVNDTYGHGVGDLLLQITAQRILGCVRNSDTVARFGGD 385

Query: 368 EFTILLTDVHGRESVENAIAKIREILSLPVAIAGKTVRVCCSIGSAVYPEDGETARLLFS 427
           EF ILL  V   ++      KI E+L+ P  +  + + +  SIG A+YPE G+  + L S
Sbjct: 386 EFVILLERVDSAQNTLLVAQKILEVLNHPFELVNQQIHILPSIGIALYPEHGKDEKQLLS 445

Query: 428 KADAAMYASKR 438
            AD+AMY +KR
Sbjct: 446 CADSAMYKAKR 456