Pairwise Alignments

Query, 180 a.a., 2',5' RNA ligase from Marinobacter adhaerens HP15

Subject, 174 a.a., RNA 2' 3'-cyclic phosphodiesterase from Methanococcus maripaludis S2

 Score = 65.1 bits (157), Expect = 6e-16
 Identities = 49/178 (27%), Positives = 84/178 (47%), Gaps = 12/178 (6%)

Query: 3   RLFFGLELPAEIKARL--LKVRSPVTGARWQSAEQLHITLLFLGKVSGEGLEAVASSARE 60
           R F  +EL  ++K  L  LK +  + G +    E LHIT+ FLG +  + LE + +S  +
Sbjct: 2   RCFLAIELKTDLKENLEVLKKQFNLKGIKTVEKENLHITVKFLGDIDDKKLEEIVNS--D 59

Query: 61  IDSESFPLEVAGVGCFGQPERPKNLWAGVQPAAPVAALHQTLGRRLESLGFVAERRAFRP 120
           +  +    E+ GVG F   E  + +W G      +    + +  +L  LGF  E +++ P
Sbjct: 60  LKIKKVISEIKGVGTFPNEEYIRVIWVG---TTNLQETFKNIDEKLFKLGFKKE-KSYDP 115

Query: 121 HITLARFK----RQPGSVEPLLVEYGDNGFGQFQVTEFVLFESKPGPAGSVYSVVDRF 174
           HITL R K        +++ L+ +     FG+ ++    L +S     G VY  V ++
Sbjct: 116 HITLGRVKFIENDSKETLKKLIEKNKHVNFGKIEINSVSLMKSTLTKNGPVYETVKKW 173