Pairwise Alignments

Query, 436 a.a., 23S rRNA 5-methyluridine methyltransferase from Marinobacter adhaerens HP15

Subject, 444 a.a., 23S rRNA 5-methyluridine methyltransferase (RefSeq) from Shewanella loihica PV-4

 Score =  302 bits (774), Expect = 1e-86
 Identities = 168/428 (39%), Positives = 241/428 (56%), Gaps = 9/428 (2%)

Query: 5   IETLSHDGRGIARQDGKTQFVDGALPGETVMAKVVSSRSKFDELRTEEVLDAAPGRQTPP 64
           +  L H G GIA   GK  F+ GALP ETV A++V  + +  + +  +V  A+  R    
Sbjct: 23  VSQLDHLGAGIAEHQGKIVFIPGALPDETVTAQIVEQKKRHAKAKLIKVESASAARIEAS 82

Query: 65  CEFADLCGGCSLQHMSGDAQIEFKENTLREHFAHFGGIEPEEWIAPLRSEESLGYRRKAR 124
           C +   CGGC LQH+   AQ + K+  L       G  +P+    PL S E   YRR+AR
Sbjct: 83  CPYYGRCGGCDLQHLELSAQRDAKQTALENLINKMGRTQPQTMSEPL-SGEGWHYRRRAR 141

Query: 125 LGVRYVKARESVLVGFREKRNSFLTDIDRCVVLDPRIGERILPLRNMLHDLEAYSRIPQV 184
           L  +Y++  + + +GFR   +S + +ID C VL   + E I PL   L+ L A   +  V
Sbjct: 142 LATQYLRDTKQLNLGFRALASSEVVNIDACPVLAKSLSELIAPLNQCLNRLSAKRSLGHV 201

Query: 185 EIACGDDVAVMVFRNMDELSVGDREKLIAFGQAHELHIYLQPKGPDTVHRIWPESAGRDE 244
           E+   D    +V R    L+  D+  L  FG+ H++ + L       +  +W       +
Sbjct: 202 ELLSVDSGPCVVLRITSPLNDKDKALLATFGEQHKVRLVLLDDD-SKLETLW------GD 254

Query: 245 ERLSYRLDEFDLTMRFHPMDFTQVNAGINRAMVHRAVEWLDVQPGERVLDLFCGLGNFTL 304
           E L Y   E   ++ F P +F QVN  IN+ MV +A++WL +QPGERVLDLFCG+GNFTL
Sbjct: 255 EGLPYYTLEDGSSLGFSPGNFIQVNGEINQQMVTQAIDWLQIQPGERVLDLFCGVGNFTL 314

Query: 305 PLATRGGQVVGVEGDETMVVRGRENAELNGLDNVAFHGADLHGDFTGQSWAKEGFDKILI 364
           PLA  G QVVGVEG + MV + R NA ++G++   F+  DL  D +   W     DK+L+
Sbjct: 315 PLAKAGAQVVGVEGVDAMVAQARVNATMSGVEGAEFYHGDLSADLSAAPWLGR-IDKLLL 373

Query: 365 DPPRSGAEEICKYLTAFGAQKIVYVSCNPATLARDAGVMVRNGYRLVRAGVMDMFPHTTH 424
           DP R+GA E  ++L     + IVY+SCNP +LARD   ++  GY+L R G++DMFP T H
Sbjct: 374 DPARAGAYESLQWLKKMKPKAIVYISCNPVSLARDCEPLLAQGYQLSRLGLIDMFPQTHH 433

Query: 425 VESIALFE 432
           +E++ALFE
Sbjct: 434 IEAMALFE 441