Pairwise Alignments

Query, 436 a.a., 23S rRNA 5-methyluridine methyltransferase from Marinobacter adhaerens HP15

Subject, 414 a.a., (Uracil-5)-methyltransferase (RefSeq) from Dinoroseobacter shibae DFL-12

 Score =  120 bits (300), Expect = 1e-31
 Identities = 118/412 (28%), Positives = 167/412 (40%), Gaps = 45/412 (10%)

Query: 29  LPGETVMAKVVSSRSKFDELRTEEVLDAAPGRQTPPCEFADLCGGCSLQHMSGDAQIEFK 88
           LPGE +  ++       D +   +++   P R  PPC     CGGC+LQH +     ++K
Sbjct: 32  LPGEEIRGEITG-----DRIAAPKIVTPCPNRVKPPCPHYARCGGCALQHAADPFVADWK 86

Query: 89  ENTLREHFAHFGGIEPEEWIAPLRSEESLGYRRKARLGVRYVKARESVLVGFREKRNSFL 148
              + +  +  G   P   + P+R+      RR+A L  R +K  +  L+GF  + +  +
Sbjct: 87  VQVVIDALSAHGLSAP---MRPIRTSPPRT-RRRATLSGRRLK--KGTLLGFHTRASDTI 140

Query: 149 TDIDRCVVLDPRIGERILPLRNMLHDLEAYSRIPQVEIACGDDVAVMVFRNMDELSVGDR 208
            DI  C VL P I E +  L   L  L +      + +   +    +  R    L    R
Sbjct: 141 VDIPGCEVLAPAITEALPSLAEFLPLLGSRKGELALAVTVSEAGLDVDIRGGKPLDPALR 200

Query: 209 EKLIAFGQAHEL-------HIYLQPKGPDTVHRIWPESAGRDEERLSYRLDEFDLTMRFH 261
             L A  Q  +L        ++L  + P       P S                      
Sbjct: 201 LSLTALTQRLDLARLSLDGKVFLTLRPP--AQHFGPASVTPP------------------ 240

Query: 262 PMDFTQVNAGINRAMVHRAVEWLDVQPGERVLDLFCGLGNFTLPLATRGGQVVGVEGDET 321
           P  F Q  A    A++    E   V P  R+ DLF G G F LPLATR  +V  VEGD  
Sbjct: 241 PGAFLQATAPGEAALLAAVTE--AVGPARRIADLFAGCGTFALPLATRA-EVHAVEGDAD 297

Query: 322 MVVRGREN-AELNGLDNVAFHGADL-HGDFTGQSWAKEGFDKILIDPPRSGAEEICKYLT 379
           M+        +  GL  V     DL          A+  F  ++IDPPR+GAE     L 
Sbjct: 298 MLAALDAGWRKTPGLSKVTTEARDLFRRPLLPDDLAR--FGAVVIDPPRAGAEAQTAALA 355

Query: 380 AFGAQKIVYVSCNPATLARDAGVMVRNGYRLVRAGVMDMFPHTTHVESIALF 431
           +    +I  VSCNP T ARDA  +   GY L    V+D F  + HVE  A F
Sbjct: 356 SAQPDRIAAVSCNPVTFARDAKTLCDAGYALRWVQVVDQFRWSPHVELAAAF 407