Pairwise Alignments

Query, 436 a.a., 23S rRNA 5-methyluridine methyltransferase from Marinobacter adhaerens HP15

Subject, 472 a.a., 23S rRNA methyltransferase from Burkholderia phytofirmans PsJN

 Score =  352 bits (904), Expect = e-101
 Identities = 193/446 (43%), Positives = 264/446 (59%), Gaps = 21/446 (4%)

Query: 4   EIETLSHDGRGIARQD------GKTQFVDGALPGETVMAKVVSSRSKFDELRTEEVLDAA 57
           EI +L  + RG+ R +      GK  FV+GALPGE V      S+ KF++    +V   +
Sbjct: 33  EIVSLDMEARGVGRTETEDGTSGKVIFVEGALPGERVSYSTHRSKPKFEQAEVVQVFRES 92

Query: 58  PGRQTPPCEFADLCGGCSLQHMSGDAQIEFKENTLREHFAHFGGIEPEEWIAPLRSEESL 117
             R  P C + D+CGGCS+QH+   AQ+  K+  L ++  H   + PE    P+    S 
Sbjct: 93  VMRTKPKCTYFDICGGCSMQHLDIRAQVAVKQRVLEDNLQHLAKLRPETVFRPIHGP-SW 151

Query: 118 GYRRKARLGVRYVKARESVLVGFREKRNSFLTDIDRCVVLDPRIGERILPLRNMLHDLEA 177
           GYR +ARL VR++  +  + +GF EK++S++ D+  C VL P +   ++PLR M+  L  
Sbjct: 152 GYRYRARLAVRFLPEKGGMRIGFHEKKSSYIADMKTCEVLPPHVSAMLMPLRFMVRKLSI 211

Query: 178 YSRIPQVEIACGDDVAVMVFRNMDELSVGDREKLIAFGQAHELHIYLQPKGPDTVHRIWP 237
           Y R+PQ+E+A G  V  +V RN++ ++  D + L  F   H++  +LQP GPDTV   +P
Sbjct: 212 YDRMPQLELAVGSSVTALVVRNLEPITAADEQVLRDFADQHKVQFWLQPGGPDTVAPFYP 271

Query: 238 ESAGRDEERLSYRLDEFDLTMRFHPMDFTQVNAGINRAMVHRAVEWLDVQPGERVLDLFC 297
             A     +L Y L E+ + M F P DFTQVN  INR +V RA+  L     +RVLDLFC
Sbjct: 272 LDA-----QLDYTLPEYGIRMPFKPTDFTQVNHAINRVLVSRALRLLAPARTDRVLDLFC 326

Query: 298 GLGNFTLPLATRGGQVVGVEGDETMVVRGRENAELNGL-DNVAFHGADLHGDFTGQSWAK 356
           G+GNFTLPLA    +VVG+EG E +  R   NAELNG+  + +F   +L         A 
Sbjct: 327 GIGNFTLPLARISKEVVGIEGSEVLTARALANAELNGVAGHTSFACRNLFEITADDMRAL 386

Query: 357 EGFDKILIDPPRSGAEEICKYLTAFG-------AQKIVYVSCNPATLARDAGVMVRN-GY 408
             FDK LIDPPR GA  + K L            ++IVYVSC PATLARDAG++V   GY
Sbjct: 387 GHFDKFLIDPPREGALAVAKALVEIAQSGDGPLPKRIVYVSCAPATLARDAGLLVHEAGY 446

Query: 409 RLVRAGVMDMFPHTTHVESIALFEKD 434
           RLV AGV++MFPHT+HVESIALFE+D
Sbjct: 447 RLVGAGVVNMFPHTSHVESIALFERD 472