Pairwise Alignments

Query, 436 a.a., 23S rRNA 5-methyluridine methyltransferase from Marinobacter adhaerens HP15

Subject, 384 a.a., 23S rRNA methyluridine methyltransferase (RefSeq) from Shewanella sp. ANA-3

 Score =  112 bits (281), Expect = 2e-29
 Identities = 81/254 (31%), Positives = 124/254 (48%), Gaps = 18/254 (7%)

Query: 189 GDDVAVMVFRNMDELSVGDREK---LIAFGQAHELHIYLQPKGPDTVHRIWPESAGR--- 242
           G+ +   V R+ D ++  +RE    +  + Q   + + LQP     VH    E       
Sbjct: 141 GEYMLRFVLRSRDAIARIERELPTLMAEYPQIKVVSVNLQP-----VHMAILEGEEEIFL 195

Query: 243 -DEERLSYRLDEFDLTMRFHPMDFTQVNAGINRAMVHRAVEWLDVQPGERVLDLFCGLGN 301
            +  RL  R ++  L +R  P  F Q N  +   +   A EW+       + DLFCG+G 
Sbjct: 196 TENTRLEERFNDVPLFIR--PKSFFQTNPQVAAKLYQTAREWVADFAPASLWDLFCGVGG 253

Query: 302 FTLPLATRGGQVVGVEGDETMVVRGRENAELNGLDNVAFHGADLHGDFTGQSWAKEGFDK 361
           F L  A +   + G+E +   +   + +A+L GLD V F   D   DF     A+   + 
Sbjct: 254 FGLHCAAKDIPLTGIEIEAEAIACAKMSAQLMGLDKVEFMALD-STDFAKGEAAQTKPEL 312

Query: 362 ILIDPPRSG-AEEICKYLTAFGAQKIVYVSCNPATLARDAGVMVRNGYRLVRAGVMDMFP 420
           I+++PPR G  E +C  L+ F  + I+Y SCNP TLA+D G +   GYRL +  + D+FP
Sbjct: 313 IIVNPPRRGIGESLCHSLSEFAPKAILYSSCNPKTLAKDLGHI--RGYRLTKVQLFDLFP 370

Query: 421 HTTHVESIALFEKD 434
           H+ H E +AL  KD
Sbjct: 371 HSDHFEVLALLVKD 384