Pairwise Alignments

Query, 247 a.a., RNA polymerase sigma-70 RpoE type from Marinobacter adhaerens HP15

Subject, 199 a.a., RNA polymerase sigma factor RpoE from Dechlorosoma suillum PS

 Score =  218 bits (554), Expect = 9e-62
 Identities = 107/190 (56%), Positives = 144/190 (75%), Gaps = 2/190 (1%)

Query: 56  DSQTDLQLVRKVRNGDRAAFDLLVVKYQSRVASIISRYVYDSQEVMDLTQETFVKAFRAI 115
           + + D +LV + ++GD+ AF+LLV KYQ ++  ++SR++ D  EV D+ QE F+KA+RA+
Sbjct: 3   EREIDQKLVERAQSGDKKAFELLVAKYQRKLGRLLSRFIRDPAEVEDVAQEAFIKAYRAL 62

Query: 116 ERFRGDSAFYTWLYRIAVNTAKNYLESRGRRPQGSA--DSAEAENFDDGSRLRDTASPER 173
             FRGDSAFYTWLYRI +NTAKNYL ++GRR   S   DS EAE FDDG +LRD  +PE 
Sbjct: 63  PSFRGDSAFYTWLYRIGINTAKNYLVAQGRRAPTSTEFDSEEAETFDDGEQLRDINTPEN 122

Query: 174 LLQREQLQKELNKAIAQLPEELRSAFLLREYDGLSYEDIAGILECPIGTVRSRIFRARDA 233
           LL  +Q+ + +N A+  LPEELR+A +LRE +GLSYE+IA I++CPIGT+RSRIFRAR+A
Sbjct: 123 LLLSKQIGETVNAAMDALPEELRTAIMLRELEGLSYEEIAKIMDCPIGTIRSRIFRAREA 182

Query: 234 VDRHLGPLLN 243
           V   L PLL+
Sbjct: 183 VATKLRPLLD 192