Pairwise Alignments

Query, 653 a.a., phage terminase GpA from Marinobacter adhaerens HP15

Subject, 629 a.a., terminase from Pseudomonas fluorescens FW300-N2E3

 Score =  231 bits (588), Expect = 1e-64
 Identities = 189/640 (29%), Positives = 302/640 (47%), Gaps = 52/640 (8%)

Query: 36  QWAEENVRIAAGNAI-PGPIRFANAPY---QREPMDMATHPGCHRISLMWGAQVGKTQLA 91
           +WA++   +A   A  PG  RF   P+      P++    P    I     AQV  T   
Sbjct: 5   EWADKYRWLAPEEAARPGKYRFDVTPHLIWPGGPLEALDDPAVSEIVGRKSAQVAWTSGV 64

Query: 92  LC-VQGYFIAHEPKSQMMMQPSQGDLTTWLETKFNPMVDTNPVLQDLIAKPRSHEGVNNQ 150
           L    G +I  +P   +++ P       ++  K  PM++  P L+  +   RS +    Q
Sbjct: 65  LGNALGKWIDIDPSPILVLFPKAEAAKQYVGEKLEPMIEATPRLRKKVDL-RSRKLQQRQ 123

Query: 151 RMKSYPGGFMMYAWAGSTKTMRGRSAPLIVADEID--GYGGTPEGDEVQLLWQRAATFGD 208
             K +PGGF+    + S  +++    P +  +E D        +GD ++L  +R  TF  
Sbjct: 124 DFKRFPGGFLKMVGSNSPASVKSTPVPRVAIEEPDDCNLNLRGQGDSIKLAKERLKTFRR 183

Query: 209 QRLLIEISTPTIKDESRIEAAFLQGDQRHFYVACPHCDHHQRLNWDRVTWDKDED----- 263
            +++I   TPTIK  S I+A     D+R   V C  C     L++D +  D+D       
Sbjct: 184 SKIIIG-GTPTIKGLSAIDAELELSDKRVGLVPCHECGQEHALSFDNLHCDEDPAYLHEV 242

Query: 264 -GHHLPETARYICEECGTLWNDGERIAAIRTAEQVGAGWKASKPFRGHASYHLNELYSCF 322
            G   PE + Y C  CG +W+D ++ A ++        W A+  FRG A Y LNELY+ F
Sbjct: 243 YGKKRPEKSFYSCPHCGAIWDDNQKNANLKHGR-----WSATAEFRGIAGYILNELYATF 297

Query: 323 --RRLRDIVQSFLDKKAA------NDLQSFVNVSLAETWEEQGEQADSHVLMQRAEEYPD 374
              R + +++  L  + A        + +FVN S  E++E Q +   +  L +RAE Y +
Sbjct: 298 WGSRFQVLMEKKLQAEHAAAQGNIGPMIAFVNSSKGESYEYQSDAPKTDELEKRAEPYTE 357

Query: 375 -PVPAGGVVLTSGIDMQQDRLEVETVAWGRGEESWSIDYTVLWGDPL--RDEVWQDLDDY 431
              P G +++T G+D+Q DRL +    WGRGEESW + +  L G+P+   D VWQ+LD  
Sbjct: 358 LTAPKGVLMITVGVDVQGDRLALVITGWGRGEESWRLYWGELHGNPIDPHDSVWQELDRV 417

Query: 432 LATTWKHESGAHLGIIAACLDTGGSTGYTQRA-YEYARRKTGRRLFAIKG--VGGWDRPV 488
           ++     + GAHL + A  +D+  S G T  A Y Y R +    + AIKG  V   D+ +
Sbjct: 418 ISQPIPSDGGAHLAVSAVSIDS--SDGNTSDAVYAYVRDRQRYNVMAIKGASVDSRDKEI 475

Query: 489 VTAP------SRKRTGRGQRKVDLFSVGTDEAKLTVMRRLAVTEPGPGYTHIPADREAEW 542
            T P      S+  T   +  + +  VGT +AK  +  RL +   GPG  H  ++  +++
Sbjct: 476 FTKPPQSVDTSQDNTKAAKYGLRVHIVGTHKAKTLIDGRLRLKGVGPGRMHWYSEIRSDY 535

Query: 543 FHQITAEKLVTKYIKGVAKREWH-QTRPRNEALDCRVYAYAALKIASPNIRRHAERLKAM 601
           + Q+T E ++  + +  +K  W  +   RNEALDC VYA  A +    ++ R  E     
Sbjct: 536 YEQLTNE-VLAPHPRNPSKMVWQKKAGRRNEALDCEVYALHAARSLKTHLLRDHE----- 589

Query: 602 SEDEGKEPEKKPTKKRDKPEPVEEPLPAEGQKPKRKTRRR 641
             D+ ++   +PT    + +PV  P+P       R TR R
Sbjct: 590 -WDQLEQQLLQPTLFNTE-QPV-APVPRRAVARGRGTRSR 626