Pairwise Alignments

Query, 323 a.a., D-alanine-D-alanine ligase from Marinobacter adhaerens HP15

Subject, 327 a.a., D-alanine--D-alanine ligase (EC 6.3.2.4) from Pseudomonas fluorescens FW300-N1B4

 Score =  346 bits (887), Expect = e-100
 Identities = 178/304 (58%), Positives = 218/304 (71%), Gaps = 2/304 (0%)

Query: 15  LVRSLGRVAVFMGGDSAEREVSLKSGKAVLAALVSAGVDAFAVDVRGCLLRTVDNPDFDR 74
           L +  GRVAV  GG SAEREVSLKSG AVL AL SAGVDAF +DV   LL+ + N   DR
Sbjct: 13  LPKDFGRVAVLFGGKSAEREVSLKSGNAVLDALQSAGVDAFGLDVGDDLLQRLLNEKIDR 72

Query: 75  VFIALHGRGGEDGTLQAILSQAGIPYTGSDVLASALAMDKLRTKYVFEGCGLPTPKFRTM 134
            FI LHGRGGEDG++Q +L   GIPYTGS +LASALAMDKLRTK V+   G+PTP+   +
Sbjct: 73  AFIILHGRGGEDGSMQGLLECLGIPYTGSGILASALAMDKLRTKQVWHSLGIPTPRHAVL 132

Query: 135 SGADQAEQIIDELRAPLSVKPSREGSSIGIRKVHTAAELAHAYEAAAALDNLVLVEEWIE 194
           S          EL  PL VKP+ EGSSIG+ KV +A+EL  A++AA+  D+ VLVE+WI+
Sbjct: 133 SSEADCISAATELGFPLIVKPAHEGSSIGMAKVTSASELIDAWKAASTYDSQVLVEQWIQ 192

Query: 195 GPEFTVSLLQDRALPAIGLSASTEHVFYDYEAKYLADDTRYRIPCGLAPEDEVRLQHLAL 254
           GPEFT++ L+D+ LP I L   T H FYDY+AKY+A DT+YRIPCGL    E  L  L  
Sbjct: 193 GPEFTIATLRDQVLPPIAL--GTTHSFYDYDAKYVASDTQYRIPCGLDSNKEKELMDLTA 250

Query: 255 EAFRVVGCRTWGRVDIMQDSDGKFWLLEVNTVPGMTDHSLVPMAAKAAGISFEELVVRIL 314
           +A   +G   WGR D+MQD+DG+FW LEVNT PGMTDHSLVPMAA+AAG+ F++LV+ IL
Sbjct: 251 KACEALGIAGWGRADVMQDADGQFWFLEVNTAPGMTDHSLVPMAARAAGLDFQQLVLAIL 310

Query: 315 KDSL 318
             S+
Sbjct: 311 AASV 314