Pairwise Alignments

Query, 323 a.a., D-alanine-D-alanine ligase from Marinobacter adhaerens HP15

Subject, 328 a.a., D-alanine--D-alanine ligase A from Pedobacter sp. GW460-11-11-14-LB5

 Score =  163 bits (412), Expect = 6e-45
 Identities = 113/330 (34%), Positives = 164/330 (49%), Gaps = 40/330 (12%)

Query: 22  VAVFMGGDSAEREVSLKSGKAVLAALVSAGVDAFAVDVRGCLLRT--------------V 67
           +A+  GG + E  VS+KS     AA ++  +D    DV   +L                +
Sbjct: 5   IALLTGGTTGEWVVSVKS-----AATIAQNIDPDLYDVYKIMLNEKGWFYEPADSVKIEI 59

Query: 68  DNPDF-----------DRVFIALHGRGGEDGTLQAILSQAGIPYTGSDVLASALAMDKLR 116
           D  DF           D VFIA+HG  GEDG LQ      GIPYT  D L S++ M+K  
Sbjct: 60  DKNDFSLTLEGRKIKFDGVFIAIHGSPGEDGKLQGYFDMLGIPYTACDALTSSITMNKGY 119

Query: 117 TKYVFEGC-GLPTPKFRTM--SGADQAEQIIDELRAPLSVKPSREGSSIGIRKVHTAAEL 173
           TK V EG   L T K   +   G     QI  +LR P  VKP+  GSSIG+ KV  A +L
Sbjct: 120 TKAVVEGINNLYTAKSVQIFKGGNHNLNQIKQDLRLPYFVKPNSGGSSIGMSKVKHADDL 179

Query: 174 AHAYEAAAALDNLVLVEEWIEGPEFTVSLLQDR----ALPAIGLSASTEHVFYDYEAKYL 229
             A E A   D  +L+EE++ G EF++ +         LP   +  + E  F+D+EAKY 
Sbjct: 180 EEAVEKAFKEDTQILIEEFVSGREFSIGVFGAEGKIIVLPTTEVIPANE--FFDFEAKYT 237

Query: 230 ADDTRYRIPCGLAPEDEVRLQHLALEAFRVVGCRTWGRVD-IMQDSDGKFWLLEVNTVPG 288
              T    P  +  E+  R+Q +  + ++ + CR   RVD  +++  GKF+ +E+NT+PG
Sbjct: 238 PGATEEITPGRMNEEELSRVQQVVKDVYKKLNCRGVVRVDYFLEEGTGKFYFIEINTIPG 297

Query: 289 MTDHSLVPMAAKAAGISFEELVVRILKDSL 318
            T  S +P    A GI+ +E   R++K++L
Sbjct: 298 QTATSFIPQQVAAMGITLKEFYTRLMKETL 327