Pairwise Alignments

Query, 352 a.a., lipopolysaccharide biosynthesis protein from Marinobacter adhaerens HP15

Subject, 314 a.a., lipopolysaccharide heptosyltransferase I from Rhodopseudomonas palustris CGA009

 Score = 70.9 bits (172), Expect = 4e-17
 Identities = 67/299 (22%), Positives = 126/299 (42%), Gaps = 23/299 (7%)

Query: 1   MNSICILRLSAIGDVTHVIPVVLSLQEQLPGVKITWVIGKIEAKLVGDLPGVEFII---- 56
           M+ I I++ S++GDV H +P V      LPG++++WV+ +  A L    P V  +I    
Sbjct: 1   MSDILIIKTSSLGDVVHQMPAVTDAARALPGLRMSWVVEEAFAPLARLHPSVTEVIPVAT 60

Query: 57  ------FDKKAGRKGYAELRRQMSGRKFDALLHMQVAFRANLAAVCIPARVRIGYDKARS 110
                    +A  +   +   ++   +FD ++  Q   R+ + A       R GYD    
Sbjct: 61  RRWRSHLASRATWREIGDFNTRLREPEFDKVIDTQGLIRSAIIARLAQGE-RHGYDAQSI 119

Query: 111 KD-LHSLFINHRIKPAPKQHVRDCLASFLEPLDLKAAPPRWQIPLNDSDHEFAREQLAND 169
           ++ L S F N          V   L +      L      +Q P+++ D+   +   + D
Sbjct: 120 REPLASRFYN------VHHSVSRSLHAVTRNRTLTGLSLGYQ-PVDEIDYGLIKPARSGD 172

Query: 170 RKNLVISPCASHTLRNWPAERYAQLADHAIQKHGMKVILVGSPAPSEAEYCAAIEAAMKE 229
               V+    S   + W AE + +     +Q  G++ +L   P  ++ E   A   +   
Sbjct: 173 TPYAVLLHGTSRVSKEWRAEDWIE-TGRWLQGRGLQPVL---PWGTDTERQTAERLSSAI 228

Query: 230 KAHNICGKDTLKQLTALMTHADLVVAPDTGPAHIASAVGTDVLGLFAASNPYRSGPYNS 288
               +  +  L     ++  A +V+  DTG  H+A+A    ++G++ A++P  +GP  S
Sbjct: 229 PGSRVLSRQPLDLTAGVIAGATVVIGVDTGLLHLAAAYRVPLVGIYVATDPGLTGPVGS 287