Pairwise Alignments

Query, 335 a.a., outer membrane protein (porin) from Marinobacter adhaerens HP15

Subject, 351 a.a., outer membrane porin, putative (RefSeq) from Shewanella amazonensis SB2B

 Score = 55.5 bits (132), Expect = 2e-12
 Identities = 54/213 (25%), Positives = 99/213 (46%), Gaps = 37/213 (17%)

Query: 18  SVFAQSEMSASELAA---KMDSMPSVYGNIQYVLTHTNVDGA------GSTVEHADNGST 68
           SVF  S +SAS LA       + P  YG I Y +TH++   A      G+ +E+  N + 
Sbjct: 2   SVFRLSLLSASLLAGVSLHAQATPDFYGRIDYSVTHSDTGAATHKGLDGTVLEN--NFTR 59

Query: 69  LGVKHDHEIAPGITGFFKLELEGINADDKSSSNGIDALDEAYIGVKGDSFGQVWVGSDDS 128
           LGV+    +  G+T F+++E+ G+++  +S ++        +IG++  ++G +  G  + 
Sbjct: 60  LGVRGTEALTEGLTLFYQVEM-GVDSASESGNSKPFTARPTFIGIRHANWGSLAAGRMEP 118

Query: 129 VYESAIVKIGNFHEVGSDIFGNYSTGE----------GDLVQYMSPSFGGLTVAAAVQVN 178
           V++     +        D+F NYS             GD  +Y +P + G  + A++ + 
Sbjct: 119 VFKMTKGFV--------DVFDNYSMKHDRLMAGDKRWGDSFEYKTPVWHGWQLGASLLLE 170

Query: 179 G----DNDTKGGADKSYPYQLVATYAVDALEVS 207
                D+D +    ++  YQL  TY    L+ S
Sbjct: 171 DNYYQDSDKR---KENGNYQLALTYGDKKLKNS 200