Pairwise Alignments

Query, 335 a.a., outer membrane protein (porin) from Marinobacter adhaerens HP15

Subject, 355 a.a., outer membrane porin, putative (RefSeq) from Shewanella amazonensis SB2B

 Score = 53.5 bits (127), Expect = 8e-12
 Identities = 84/356 (23%), Positives = 135/356 (37%), Gaps = 72/356 (20%)

Query: 1   MKKTLIASAIAAATFSGSVFAQSEMSASELAAKMDSMPSVYGNIQYVLTHTNVDGA---- 56
           MKK+LIASA+A              + S  A   D  P+ YG +    T++N   A    
Sbjct: 1   MKKSLIASAVATGA-----------ALSSFATLADG-PAFYGRVDLAATNSNTGYATQNQ 48

Query: 57  --GSTVEHADNGSTLGVKHDHEIAPGITGFFKLELEGINADDKSSSNGIDALDEAYIGVK 114
             G+  E  +N S LGVK   +++  +   +++E  G+N  D S           ++G++
Sbjct: 49  KDGTVFE--NNFSWLGVKGSEKLSQNVALIYQMEF-GVNNFDNSGDT--FNTRNTFVGLQ 103

Query: 115 GDSFGQVWVGSDDSVYESAIVKIGNFHEVGSDIFGNYS-------TGE---GDLVQYMSP 164
             + G   +G +DSV++ +        E G D+FGN +        G+   GD + Y SP
Sbjct: 104 TQA-GTALIGRNDSVFKQS--------EGGFDLFGNTNADIDLLVAGQSRLGDSITYYSP 154

Query: 165 SFGGLTVAAAVQVNGDNDTKG-----GADKSY---PYQLVATYAVDALEVSFGMDSNDGG 216
               +    A  V  DN  +G     G D  +    Y L AT    AL+           
Sbjct: 155 KIAHILTLNATYVMEDNYEEGSWFNPGEDDEWSGNTYALSATLGDKALKA---------- 204

Query: 217 AAADNNENSYGLTATYSAGDFSVIGEYQTRKDVNDIVGVMGVYTMGANQFALSYQMLDDD 276
                   +Y + A Y+ G    I  Y+    V     V+G     +   A  Y  L+ D
Sbjct: 205 -------QNYYVAAAYNDG-LDGIKAYRGVAQVKFGELVLGALYQNSEHVADKYSNLEGD 256

Query: 277 A----SGDKKDTVILQALHNVSDHMYVYFEGYLSGADAANEYSLEGASGDEQSIAA 328
                +G K     L+A +   D     + G + G        +E     + ++ A
Sbjct: 257 TWFINAGYKLGNTTLKASYGQDDSGLGKYVGRMVGDSDVGMEQVENVDLQQYTLGA 312