Pairwise Alignments

Query, 335 a.a., outer membrane protein (porin) from Marinobacter adhaerens HP15

Subject, 359 a.a., porin (RefSeq) from Shewanella sp. ANA-3

 Score = 67.8 bits (164), Expect = 4e-16
 Identities = 78/285 (27%), Positives = 118/285 (41%), Gaps = 61/285 (21%)

Query: 1   MKKTLIASAIAAATFSGSVFAQSEMSASELAAKMDSMPSVYGNIQYVLTHTNVDGAGSTV 60
           MKKT I++++A+     S  A +E             PS YG ++  +T+T     G+T+
Sbjct: 1   MKKTFISASVASVLALASFGALAEG------------PSFYGRLELAVTNTET---GATL 45

Query: 61  EHADNG-------------------STLGVKHDHEIAPGITGFFKLELEGINADDKSSSN 101
           +   NG                   S LGVK   +IA G    +++E +    +  S S 
Sbjct: 46  QSGTNGLNSNYADENNAGTYLENNFSLLGVKGTEKIADGYDVVYQMEFQ---VESTSGSG 102

Query: 102 GIDALDEAYIGVKGDSFGQVWVGSDDSVYESAIVKIGNFHEVGSDIFGNYS--------- 152
            +      Y+G+K ++ G V VG +D+V++ A        E G DIFGN +         
Sbjct: 103 DVFKARNTYLGLKTNA-GTVLVGRNDTVFKQA--------EGGVDIFGNTNADIDRLVSA 153

Query: 153 -TGEGDLVQYMSPSFGGLTVAAAVQVNGDNDTKGGADKSYPYQLVATYAVDA-LEVSFGM 210
            T   D V Y SP  GGL    A  +  DN+ +    K  P    + YA+ A L  S   
Sbjct: 154 QTRSADGVWYFSPKLGGLVTLNANYLFDDNNDEKIDGKPAPDTNESLYALSATLGDSKFK 213

Query: 211 DSNDGGAAADN----NENSYGLTATYSAGDFSVIGEYQTRKDVND 251
           + N   A A N      ++Y   A    G F + G +Q  + V D
Sbjct: 214 EQNYYVAVAYNKGIAGVDAYRGVAQAKLGQFKLGGLFQNSESVTD 258