Pairwise Alignments

Query, 407 a.a., bifunctional methionine sulfoxide reductase A/B protein from Marinobacter adhaerens HP15

Subject, 301 a.a., protein-methionine-S-oxide reductase, PilB family (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  149 bits (377), Expect = 8e-41
 Identities = 74/162 (45%), Positives = 100/162 (61%), Gaps = 4/162 (2%)

Query: 29  KSESQMSKYAPDQPGLAVATFAGGCFWCVEAGYEKRVPGVVEVVSGYSGGKEASPSYKQV 88
           K++ +    AP     A ATF  GCFWCVEA + K + GV+ V SGYSGG+ +   YK V
Sbjct: 115 KAQDEAEDIAPKH---AFATFGAGCFWCVEAIF-KSLKGVLNVRSGYSGGEASDADYKSV 170

Query: 89  ASGQTGHTEAVQVYYDPNEMTYEGLLQALWRMMDPTDNQGQFVDRGQQYRPAIFYHNAEQ 148
            SGQTGH E V + +DP ++ +  LLQ L+   DPT    Q  D+G QYR  +F H+A Q
Sbjct: 171 CSGQTGHAEVVHIEFDPEQIAFTTLLQVLFESHDPTTLNRQGNDKGPQYRSVVFAHDATQ 230

Query: 149 KRLAEAAVAELEASGVYEKPVVIEIVPFEKFYPAEEYHQDYY 190
              A A +A+L  + V++ P+V ++V FE FYPAE YH DY+
Sbjct: 231 VDEANAMIAKLTEARVFDAPIVTQVVAFESFYPAEAYHNDYF 272



 Score = 76.3 bits (186), Expect = 1e-18
 Identities = 46/123 (37%), Positives = 66/123 (53%), Gaps = 4/123 (3%)

Query: 270 RLTDMQYEVTQEDGTEPAFNNKYWDNKKPGLYVDIVSGEPLFSSRDKYKSGTGWPSFTRP 329
           +LTD +  V +E GTE  F+ +Y+ +   G+Y+      PL+ S DK+ +  GWP+F   
Sbjct: 3   KLTDFERYVIEEKGTERPFSGQYYQHDAKGVYLCKKCHTPLYRSEDKFNAHCGWPAFDDE 62

Query: 330 ITPDAVVEREDNSFFMTRTEIRSSHADSHLGHVF-NDGPAPTGLRYCMNSASMDFIPLEK 388
           I P AV    D      RTEI  S    HLGHVF  +   P  +R+C+NS SM F   ++
Sbjct: 63  I-PGAVSRHIDAD--GRRTEIVCSQCGGHLGHVFEGEFLTPKNIRHCVNSVSMLFKAQDE 119

Query: 389 MEE 391
            E+
Sbjct: 120 AED 122