Pairwise Alignments

Query, 538 a.a., methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor from Marinobacter adhaerens HP15

Subject, 528 a.a., PAS domain S-box from Pseudomonas stutzeri RCH2

 Score =  347 bits (891), Expect = e-100
 Identities = 204/531 (38%), Positives = 302/531 (56%), Gaps = 21/531 (3%)

Query: 15  MRKNLPVTQREVKMRKGGRLITTTDLRGVITYCNEEFVEISGFSREELVGQAHNIIRHPD 74
           MR NLPVT R+V   +   +++TTDL G ITY N +F++ISGF   EL+GQ HNI+RHPD
Sbjct: 1   MRMNLPVTGRDVSFSETANILSTTDLNGDITYVNPDFIKISGFEESELIGQHHNIVRHPD 60

Query: 75  MPQAVFKDMWDYLKAGKAWMGVVKNRAKSGDHYWVSAYVTPIRENGQMVGFESVRVEPTR 134
           MP   F D+W  ++ G++WMG+VKNR K+GDHYWVSA+VTPI  NG+++ ++SVR +P  
Sbjct: 61  MPTEAFADLWGSVRGGRSWMGMVKNRCKNGDHYWVSAFVTPISRNGRVMEYQSVRTKPQP 120

Query: 135 EQIARAERLYSKISAGKMTSSFSNRALSMLRSGWPFLVSLVLSLGALKINQPWLAAGLIV 194
            QIA AERLY+++   +   +   + LS         V+L  +LGA     P + AG ++
Sbjct: 121 AQIAAAERLYAQLRDKRTPVALRRKPLSARSR-----VALFAALGAA----PCVVAGGLL 171

Query: 195 MGH------------ALGFGLVFNSLAARLRKLLDLRPDAFRDPIVARTYSDERGLFSQL 242
            G             ALG G +     A L++L +       +P+    Y+  R  + Q+
Sbjct: 172 GGAGVAIALATAAAAALGAGGLAYLALAPLQQLAEQARQVGDNPVGQLIYAGRRDEYGQI 231

Query: 243 SLLLVSEEARVRTALARIDDQAELLYEQARASHGYISDGAAAIARQRAETDQTASAINEM 302
           +  +   E      + RI D +  L + A    G +     + +RQ++ETDQ A+AIN+M
Sbjct: 232 AFAMKMLETEAGAMVGRIGDASRQLSQHAHELLGAMDSSTQSASRQQSETDQVATAINQM 291

Query: 303 TASIQEVAESVTSNAREAEEANRLAGVGSDRSAEALVAIEELVTRVNGIGSTISKLGEST 362
            AS+QEVA +    A  A  A+     G++       AI +L   +   G  I +L   +
Sbjct: 292 AASVQEVANNAQRTAEAASRADSETATGTEVVNRTGAAIGQLAQDIQQAGDVIHELEAHS 351

Query: 363 NSIGEAANLISEIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRSLARRTRESTVRIQ 422
           N I +  ++I  IAEQTNLLALNAAIEAARAGEQGRGFAVVADEVR+LA RT++ST  I 
Sbjct: 352 NDITKVLDVIRGIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRNLASRTQQSTQEIN 411

Query: 423 NVIDDFRQQVDSAVQATRDGEAVAGQGLEKVREAENSLRDIVTSIQTISDSFISMSAAFE 482
            +I   +     AV+  +     A Q +E   +A  SL  I + +  IS+    ++AA E
Sbjct: 412 GMIGALQGGARQAVEVMQRSREQAMQSVEHAAQAARSLHGINSRVTEISEMSQQIAAAVE 471

Query: 483 EQSQVSDEINRQITNIAELADHSDAQADSAKQSSDRLSAMSRGLKDLIARF 533
           +QS VS+ IN+ I +I   +DH  A    ++QS+  ++ ++  ++ L+ +F
Sbjct: 472 QQSAVSENINQNIVSIRGGSDHHVANGLRSRQSASGVAELANSMEVLVQQF 522