Pairwise Alignments

Query, 538 a.a., methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor from Marinobacter adhaerens HP15

Subject, 517 a.a., putative methyl-accepting chemotaxis sensory transducer (RefSeq) from Shewanella amazonensis SB2B

 Score =  290 bits (742), Expect = 9e-83
 Identities = 188/493 (38%), Positives = 273/493 (55%), Gaps = 15/493 (3%)

Query: 15  MRKNLPVTQREVKMRKGGRLITTTDLRGVITYCNEEFVEISGFSREELVGQAHNIIRHPD 74
           M K+ P+ QRE+++ +   LI+TTDLRGVITY N  F++ISG+S++ELVG +HNI+RHPD
Sbjct: 4   MSKHRPINQREIRLNQDDELISTTDLRGVITYANPRFIQISGYSKQELVGHSHNIVRHPD 63

Query: 75  MPQAVFKDMWDYLKAGKAWMGVVKNRAKSGDHYWVSAYVTPIRENGQMVGFESVRVEPTR 134
           MP   F ++W  LKAG++W G+VKNRAK G  YWV A+VTPI E G++VG++SVR  P  
Sbjct: 64  MPADAFAELWSKLKAGQSWRGLVKNRAKDGSFYWVDAFVTPIFEAGKIVGYQSVRRMPQT 123

Query: 135 EQIARAERLYSKISAGKMTSSFSNRALSMLRSGWPFLVSLVLSLGALKINQPWLAAGLIV 194
           E + RA R+Y ++  GK       R LS+   G   ++S +++   L I       G++V
Sbjct: 124 EWVNRATRIYQRLQQGKGLP----RHLSL---GQKRIISALVATTGLGICGLLWGPGVMV 176

Query: 195 MGHAL-GFGL-VFNSLAARLRKLLDLRPDAFRDPIVARTYSDERGLFSQLSLLLVSEEAR 252
            G  L G  L +F   A R+   L      F D +    Y       S L   L+ ++AR
Sbjct: 177 AGALLMGVNLAIFYDEAFRIPARLMALQQEF-DSVSRHVYCG-YDTSSILDFQLLLQQAR 234

Query: 253 VRTALARIDDQAELLYEQARASHGYISDG--AAAIARQRAETDQTASAINEMTASIQEVA 310
           ++  L R  DQA  L  Q  A +  ++ G   A++  Q  + +Q A A+ EMTA+I EVA
Sbjct: 235 MQGVLGRSQDQA--LQLQRIAENLVVASGQTEASLDMQHRQLEQLACAMEEMTATIGEVA 292

Query: 311 ESVTSNAREAEEANRLAGVGSDRSAEALVAIEELVTRVNGIGSTISKLGESTNSIGEAAN 370
            +    + +  +A +L    +   +E  V I  L   V    S   KL      +  A +
Sbjct: 293 LNSRQTSEKIRDAQQLCQHNAHAMSEKRVRIANLADAVAEAASNAEKLNREAEKVASAMS 352

Query: 371 LISEIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRSLARRTRESTVRIQNVIDDFRQ 430
            I  IAEQTNLLALNAAIEAARAGEQGRGFAVVADEVR+L+ RT++ST+ I   ++    
Sbjct: 353 EIDAIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRALSSRTQQSTMSISRSVEQMFS 412

Query: 431 QVDSAVQATRDGEAVAGQGLEKVREAENSLRDIVTSIQTISDSFISMSAAFEEQSQVSDE 490
            + S  +     +  A      + E+ + +++I   I  I D     + A  +Q  V  +
Sbjct: 413 MLGSWAEEMGRSQQEAEACARAIAESVDDIQNIHVQISEIHDFAEQNAVASAQQETVVAD 472

Query: 491 INRQITNIAELAD 503
           +N+ +  IA  A+
Sbjct: 473 MNQNLQQIAHGAN 485