Pairwise Alignments

Query, 538 a.a., methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor from Marinobacter adhaerens HP15

Subject, 522 a.a., methyl-accepting chemotaxis protein (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  285 bits (728), Expect = 4e-81
 Identities = 171/509 (33%), Positives = 274/509 (53%), Gaps = 4/509 (0%)

Query: 25  EVKMRKGGRLITTTDLRGVITYCNEEFVEISGFSREELVGQAHNIIRHPDMPQAVFKDMW 84
           E  + +   L++TTDL+G I Y N+ F +IS +S  EL G  HNI+RH DMP A FK +W
Sbjct: 9   EKHLSENAILLSTTDLKGNIKYVNQTFSQISEYSVAELQGSPHNIVRHEDMPAAAFKMLW 68

Query: 85  DYLKAGKAWMGVVKNRAKSGDHYWVSAYVTPIRENGQMVGFESVRVEPTREQIARAERLY 144
           D +K GK WMG+VKN+ K+G +YWV+AYV P+ E+G++  ++SVR + T EQI  AE +Y
Sbjct: 69  DRIKTGKPWMGIVKNKTKNGSYYWVNAYVAPVYEDGKIHEYQSVRRQATPEQIRAAEEVY 128

Query: 145 SKISAGKMTSSFSNRALSMLRSGWPFLVSLVLSLGALKINQPWLAAGLIVMGHALGFGLV 204
             I+ GK   +     L         +   + +  +L    P LAA   ++G  + + L 
Sbjct: 129 LAINQGKQAKTLKKDRLGFRGKILTAMFVAIAATASLACYSPLLAA---LVGGLIAWFLW 185

Query: 205 FNSLAARLRKLLDLRPDAFRDPIVARTYSDERGLFSQLSLLLVSEEARVRTALARIDDQA 264
           +  L   L+ L+ +  +   DP+    Y+  +    ++ L L    + +   + R+ D A
Sbjct: 186 YK-LMQPLQALVSVATNIIDDPVAMGIYTGRQDEIGKIDLALRFLISEIGGVVGRMADSA 244

Query: 265 ELLYEQARASHGYISDGAAAIARQRAETDQTASAINEMTASIQEVAESVTSNAREAEEAN 324
             + EQ+      I++       Q A+T Q A+A+ +M+AS  EV +++   A E   ++
Sbjct: 245 SEIQEQSVNLKQTITNTWEHADSQSAQTTQAATAMEQMSASFAEVTDNIHRTASEMVSSH 304

Query: 325 RLAGVGSDRSAEALVAIEELVTRVNGIGSTISKLGESTNSIGEAANLISEIAEQTNLLAL 384
             A  G  R    + AI +L  +V+     +  + + + +I +   +I  IA+QTNLLAL
Sbjct: 305 EAAQRGHSRLETVIEAIHQLSVQVSHFSDVVQTIEQDSQAIHQVLEVIRAIADQTNLLAL 364

Query: 385 NAAIEAARAGEQGRGFAVVADEVRSLARRTRESTVRIQNVIDDFRQQVDSAVQATRDGEA 444
           NAAIEAARAGE GRGFAVVADEVR L+ RT +ST +I+ ++  FR     A      G+ 
Sbjct: 365 NAAIEAARAGESGRGFAVVADEVRQLSSRTSQSTSQIELIVSRFRDSTQRATSTMTAGQE 424

Query: 445 VAGQGLEKVREAENSLRDIVTSIQTISDSFISMSAAFEEQSQVSDEINRQITNIAELADH 504
              + +   ++A  +  ++++SI  I+      +AA  +Q+ V+ EI+R I  I++LA  
Sbjct: 425 QVKRSVSLAQDASVAFGELLSSISRINSLSDDNAAAMTQQTTVAAEISRAIHVISDLAQQ 484

Query: 505 SDAQADSAKQSSDRLSAMSRGLKDLIARF 533
           S  Q   A    +++S +S     L  +F
Sbjct: 485 SLQQTQDAAARGEQVSRLSTKTHHLSQQF 513